D. rerio Gene: cpt1cb - ENSDARG00000037943 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037943
Namecpt1cb
Descriptioncarnitine palmitoyltransferase 1Cb [Source:ZFIN;Acc:ZDB-GENE-050417-155]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-16p21.4, zgc:112484

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.30e3
  • 6.30e3
78.91
  • 78.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.67e3
  • 7.67e3
74.32
  • 74.32
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
8.54e3
  • 8.54e3
  • 8.96e3
  • 8.96e3
  • 8.96e3
  • 9.96e3
  • 9.96e3
  • 1.16e4
71.42
  • 71.42
  • 69.99
  • 69.99
  • 69.99
  • 66.66
  • 66.65
  • 61.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
9.69e3
  • 9.69e3
  • 1.06e4
  • 1.22e4
  • 1.23e4
  • 1.57e4
67.54
  • 67.54
  • 64.35
  • 59.03
  • 58.87
  • 47.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.81e3
  • 9.81e3
67.14
  • 67.14
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
9.89e3
  • 9.89e3
  • 1.21e4
  • 1.27e4
  • 1.44e4
  • 1.54e4
  • 1.55e4
  • 1.66e4
  • 1.70e4
66.88
  • 66.88
  • 59.39
  • 57.41
  • 51.91
  • 48.37
  • 48.15
  • 44.42
  • 43.22
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
9.99e3
  • 9.99e3
66.54
  • 66.54
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.06e4
  • 1.06e4
64.56
  • 64.56
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.98
  • 63.98
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.90
  • 62.90
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
1.15e4
  • 1.15e4
  • 1.21e4
  • 1.43e4
61.56
  • 61.56
  • 59.64
  • 52.20
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.26
  • 59.26
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.60
  • 56.60
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.30e4
  • 1.30e4
56.52
  • 56.52
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
  • 1.56e4
55.94
  • 55.94
  • 47.75
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.76
  • 53.76
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.88
  • 52.88
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.56
  • 52.56
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.47e4
  • 1.47e4
  • 1.48e4
  • 1.48e4
  • 1.48e4
  • 1.49e4
  • 1.50e4
  • 1.51e4
  • 1.55e4
  • 1.59e4
  • 1.62e4
50.74
  • 50.74
  • 50.57
  • 50.57
  • 50.49
  • 50.04
  • 49.92
  • 49.30
  • 47.99
  • 46.72
  • 45.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.27
  • 49.27
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.83
  • 48.83
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.08
  • 48.08
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.10
  • 46.10
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
44.95
  • 44.95
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
1.67e4
  • 1.67e4
44.08
  • 44.08
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.06
  • 42.06
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.78e4
  • 1.78e4
  • 1.78e4
40.48
  • 40.48
  • 40.24
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX511021
EnsemblENSDARG00000037943 (cpt1cb)
Uniprot/SPTREMBLE7EYD4, E7EYD4_DANRE, X1WGI1, X1WGI1_DANRE
ZFINZDB-GENE-050417-155 (cpt1cb)

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