D. rerio Gene: tceb2 - ENSDARG00000037980 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000037980
Nametceb2
Descriptiontranscription elongation factor B (SIII), polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-020415-1]
OrganismDanio rerio (zebrafish)
Synonym(s)cb162, wu:fb47e08

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
526
  • 526
  • 845
  • 915
  • 953
  • 1.35e3
  • 1.61e3
98.24
  • 98.24
  • 97.17
  • 96.94
  • 96.81
  • 95.49
  • 94.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
562
  • 562
98.12
  • 98.12
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
654
  • 654
97.81
  • 97.81
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
694
  • 694
97.68
  • 97.68
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
726
  • 726
  • 790
  • 884
  • 1.08e3
  • 1.21e3
  • 1.43e3
  • 1.44e3
  • 1.76e3
  • 1.78e3
  • 3.34e3
97.57
  • 97.57
  • 97.36
  • 97.04
  • 96.38
  • 95.95
  • 95.20
  • 95.17
  • 94.10
  • 94.05
  • 88.82
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
733
  • 733
97.55
  • 97.55
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
749
  • 749
  • 835
97.50
  • 97.50
  • 97.21
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
756
  • 756
  • 1.27e3
  • 1.41e4
97.47
  • 97.47
  • 95.73
  • 52.72
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
781
  • 781
  • 1.17e3
  • 1.32e3
  • 3.54e3
  • 4.60e3
97.39
  • 97.39
  • 96.08
  • 95.58
  • 88.16
  • 84.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
832
  • 832
97.22
  • 97.22
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
843
  • 843
97.18
  • 97.18
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
878
  • 878
97.06
  • 97.06
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
894
  • 894
  • 1.04e3
97.01
  • 97.01
  • 96.52
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • ZFS:0000049segmentation
917
  • 917
  • 1.05e3
  • 1.06e3
  • 1.11e3
  • 1.12e3
  • 1.13e3
  • 1.35e3
  • 1.36e3
  • 1.65e3
  • 1.75e3
  • 1.95e3
  • 2.01e3
  • 2.02e3
  • 2.17e3
  • 1.42e4
  • 1.43e4
  • 1.45e4
96.93
  • 96.93
  • 96.48
  • 96.46
  • 96.30
  • 96.25
  • 96.23
  • 95.47
  • 95.44
  • 94.47
  • 94.16
  • 93.49
  • 93.26
  • 93.24
  • 92.74
  • 52.43
  • 52.23
  • 51.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
941
  • 941
96.85
  • 96.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
969
  • 969
96.76
  • 96.76
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.60
  • 96.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.02e3
  • 1.02e3
96.60
  • 96.60
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.07e3
  • 1.07e3
96.43
  • 96.43
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.14e3
  • 1.14e3
96.19
  • 96.19
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.15
  • 96.15
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.24e3
  • 1.24e3
  • 1.57e3
  • 1.83e3
95.85
  • 95.85
  • 94.74
  • 93.87
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.44e3
  • 1.44e3
95.19
  • 95.19
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.47e3
  • 1.47e3
  • 2.11e3
95.08
  • 95.08
  • 92.94
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.49e3
  • 1.49e3
95.02
  • 95.02
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.92
  • 94.92
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.72e3
  • 1.72e3
94.26
  • 94.26
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
94.18
  • 94.18
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.83e3
  • 1.83e3
  • 2.07e3
  • 2.22e3
  • 2.90e3
93.89
  • 93.89
  • 93.06
  • 92.58
  • 90.28
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.05e3
  • 2.05e3
93.15
  • 93.15
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.14e3
  • 2.14e3
92.85
  • 92.85
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
2.27e3
  • 2.27e3
92.41
  • 92.41
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
2.54e3
  • 2.54e3
91.50
  • 91.50
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX004999
EnsemblENSDARG00000037980 (tceb2)
Uniprot/SPTREMBLE9QFI0, E9QFI0_DANRE, F1QF30, F1QF30_DANRE
ZFINZDB-GENE-020415-1 (tceb2)

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