Gene: rac2 - ENSDARG00000038010 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000038010
Name	rac2
Description	ras-related C3 botulinum toxin substrate 2 (rho family, small GTP binding protein Rac2) [Source:ZFIN;Acc:ZDB-GENE-040625-27]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:86686
Orthologs(s)	18 orthologs
Paralog(s)	100 paralogs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	210 210	99.30 99.30	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	396 396	98.68 98.68	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	582 582	98.05 98.05	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	770 770	97.42 97.42	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	993 993	96.68 96.68	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.13e3 1.13e3	96.23 96.23	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.40e3 1.40e3	95.30 95.30	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	1.80e3 1.80e3	93.99 93.99	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000019Gastrula:Shield ZFS:0000022Gastrula:Bud	2.22e3 2.22e3 5.75e3	92.58 92.58 80.76	AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000037Larval:Day 5	2.28e3 2.28e3 9.50e3	92.38 92.38 68.20	AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	2.31e3 2.31e3 2.65e3	92.28 92.28 91.12	AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	2.50e3 2.50e3 3.74e3	91.64 91.64 87.49	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000029Pharyngula:Prim-5 ZFS:0000037Larval:Day 5 UBERON:0000068embryo stage	3.78e3 3.78e3 4.12e3 4.14e3 4.34e3 5.03e3	87.34 87.34 86.22 86.13 85.46 83.15	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	3.88e3 3.88e3	87.02 87.02	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	4.05e3 4.05e3	86.44 86.44	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	4.25e3 4.25e3	85.77 85.77	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	5.61e3 5.61e3 7.89e3	81.20 81.20 73.58	AEIR AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	5.81e3 5.81e3	80.55 80.55	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	5.96e3 5.96e3	80.04 80.04	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	6.32e3 6.32e3	78.82 78.82	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	6.54e3 6.54e3	78.10 78.10	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	7.44e3 7.44e3	75.10 75.10	AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	7.77e3 7.77e3	73.97 73.97	AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	7.82e3 7.82e3	73.83 73.83	AEIR AEIR
UBERON:0002370	thymus	[+] 1 stage ZFS:0000037Larval:Day 5	1.12e4 1.12e4	62.49 62.49	AEIR AEIR
UBERON:0001997	olfactory epithelium	[+] 1 stage UBERON:0000104life cycle	1.15e4 1.15e4	61.64 61.64	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Gorilla gorilla (gorilla) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000128340 RAC2 ENSMUSG00000033220 Rac2 ENSGGOG00000010612 RAC2 ENSMMUG00000018854 RAC2 ENSRNOG00000007350 Rac2 ENSBTAG00000011043 RAC2 ENSSSCG00000021944 RAC3 ENSECAG00000022570 RAC2 ENSOCUG00000016115 RAC2 ENSCAFG00000001508 RAC2 ENSFCAG00000025776 RAC2 ENSCPOG00000021900 RAC2 ENSEEUG00000009509 RAC2 ENSMODG00000000635 RAC2 ENSOANG00000013618 RAC2 ENSGALG00000012456 RAC2 ENSACAG00000016042 RAC2 ENSXETG00000004629 rac2	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000038010.

Paralogs (same species)

Taxon name	Gene(s)	Expression comparison	See details
Deuterostomia	5 genes ENSDARG00000020795 rac3b ENSDARG00000074849 rac1a ENSDARG00000087954 rac1b ENSDARG00000090062 rac3a ENSDARG00000099506 CABZ01028770.1	Compare expression	[+]
Eukaryota	100 genes ENSDARG00000004151 rab23 ENSDARG00000004301 rhogb ENSDARG00000005651 hrasb ENSDARG00000006553 rras ENSDARG00000007257 rab5ab ENSDARG00000008867 rap1b ENSDARG00000010844 kras ENSDARG00000012177 rab4b ENSDARG00000012553 rap1aa ENSDARG00000013161 zgc:55558 ENSDARG00000013203 RAC1 (1 to many) ENSDARG00000014340 rab11al ENSDARG00000014462 rab3c ENSDARG00000015649 rap2c ENSDARG00000015807 rab22a ENSDARG00000016059 rab5b ENSDARG00000016253 ralab ENSDARG00000018107 rab3da ENSDARG00000018328 rhocb ENSDARG00000018602 rab5aa ENSDARG00000019144 rab4a ENSDARG00000019312 rab39ba ENSDARG00000020128 RAB31 ENSDARG00000020250 rhoj ENSDARG00000020261 rab2a ENSDARG00000020497 rab7 ENSDARG00000020795 rac3b ENSDARG00000021287 zgc:91909 ENSDARG00000021309 rhoca ENSDARG00000025953 rhoq ENSDARG00000026098 si:dkey-13a21.4 ENSDARG00000026712 rab5c ENSDARG00000026845 rhoaa ENSDARG00000028401 rhogc ENSDARG00000029663 rab1ab ENSDARG00000030608 rhogd ENSDARG00000033056 zgc:171927 ENSDARG00000034215 rab42a ENSDARG00000034771 rab13 ENSDARG00000035188 rab14l ENSDARG00000036252 rras2 ENSDARG00000036499 zgc:162171 ENSDARG00000036501 rab39bb ENSDARG00000037884 rab30 ENSDARG00000037967 si:dkey-16l2.16 ENSDARG00000038225 nras ENSDARG00000039162 rhebl1 ENSDARG00000040158 cdc42l ENSDARG00000040246 rap2ab ENSDARG00000040778 ralba ENSDARG00000041450 rab11a ENSDARG00000041878 rab11ba ENSDARG00000042803 rab3b ENSDARG00000043835 rab3ab ENSDARG00000044573 cdc42 ENSDARG00000045027 rab9a ENSDARG00000045463 ralaa ENSDARG00000046106 rab10 ENSDARG00000052263 rab1aa ENSDARG00000052954 rab25b ENSDARG00000054649 rac1l ENSDARG00000056347 rab3aa ENSDARG00000056479 rab1bb ENSDARG00000057869 cdc42l2 ENSDARG00000058044 rab1ba ENSDARG00000058425 rab35b ENSDARG00000058800 rab25a ENSDARG00000059404 rab43 ENSDARG00000062865 mras ENSDARG00000067920 rab8a ENSDARG00000068628 rab8b ENSDARG00000068653 rhoga ENSDARG00000069150 rit1 ENSDARG00000070121 rhoh ENSDARG00000074246 rab14 ENSDARG00000074849 rac1a ENSDARG00000075285 MRAS (1 to many) ENSDARG00000077553 CABZ01067868.1 ENSDARG00000087243 zgc:100918 ENSDARG00000087346 rap1ab ENSDARG00000087762 rab27b ENSDARG00000087954 rac1b ENSDARG00000090062 rac3a ENSDARG00000090086 rab11bb ENSDARG00000094673 rhoab ENSDARG00000096666 RAC1 (1 to many) ENSDARG00000098497 hrasa ENSDARG00000099279 ift27 ENSDARG00000099506 CABZ01028770.1 ENSDARG00000099709 rhoac ENSDARG00000100379 si:dkey-34d22.2 ENSDARG00000101170 rab42b ENSDARG00000101534 rab3db ENSDARG00000102078 RAB35 (1 to many) ENSDARG00000102580 RAB42 ENSDARG00000103032 rap2b ENSDARG00000103391 rab9b ENSDARG00000103934 megf8 ENSDARG00000103935 rab27a ENSDARG00000105254 RAB37	Compare expression	[+]

Paralogy information comes from OMA : ENSDARG00000038010.

Cross-references

Ensembl	ENSDARG00000038010 (rac2)
ZFIN	ZDB-GENE-040625-27 (rac2)
EMBL	BC071369, BX571960
Uniprot/SPTREMBL	A2BHI1, A2BHI1_DANRE, Q6IQN5, Q6IQN5_DANRE