D. rerio Gene: prph2a - ENSDARG00000038018 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038018
Nameprph2a
Descriptionperipherin 2a (retinal degeneration, slow) [Source:ZFIN;Acc:ZDB-GENE-000616-8]
OrganismDanio rerio (zebrafish)
Synonym(s)rds2, zgc:92295

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
83.8
  • 83.8
  • 1.00e4
99.72
  • 99.72
  • 66.40
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
437
  • 437
  • 2.45e3
98.54
  • 98.54
  • 91.81
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
1.15e3
  • 1.15e3
96.17
  • 96.17
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
2.33e3
  • 2.33e3
  • 6.94e3
  • 1.48e4
92.20
  • 92.20
  • 76.77
  • 50.54
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000104life cycle
  • UBERON:0000066fully formed stage
  • ZFS:0000042Juvenile:Days 30-44
4.94e3
  • 4.94e3
  • 5.98e3
  • 1.14e4
  • 1.41e4
  • 1.47e4
  • 1.52e4
83.45
  • 83.45
  • 79.96
  • 61.80
  • 52.86
  • 50.68
  • 49.07
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
  • 1.38e4
57.14
  • 57.14
  • 53.89
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
23.07
  • 23.07
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC081641, CR678095, CR854979
EnsemblENSDARG00000038018 (prph2a)
Uniprot/SPTREMBLQ66HW7, Q66HW7_DANRE
ZFINZDB-GENE-000616-8 (prph2a)

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