D. rerio Gene: flr - ENSDARG00000038024 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038024
Nameflr
Descriptionfleer [Source:ZFIN;Acc:ZDB-GENE-070117-2066]
OrganismDanio rerio (zebrafish)
Synonym(s)a8cvx5, b3dkn4, dyf-1, ift70, ttc30, ttc30a
Orthologs(s)30 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.86e3
  • 1.86e3
93.77
  • 93.77
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
4.95e3
  • 4.95e3
83.42
  • 83.42
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
6.24e3
  • 6.24e3
  • 7.04e3
79.10
  • 79.10
  • 76.43
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
6.54e3
  • 6.54e3
78.11
  • 78.11
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.97e3
  • 6.97e3
  • 7.29e3
76.68
  • 76.68
  • 75.58
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
7.30e3
  • 7.30e3
  • 8.42e3
  • 9.22e3
  • 9.71e3
  • 1.22e4
75.55
  • 75.55
  • 71.80
  • 69.12
  • 67.48
  • 59.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
7.39e3
  • 7.39e3
  • 1.24e4
75.24
  • 75.24
  • 58.47
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
7.43e3
  • 7.43e3
75.11
  • 75.11
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.36e3
  • 8.36e3
72.01
  • 72.01
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.16
  • 71.16
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
70.12
  • 70.12
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
9.00e3
  • 9.00e3
  • 9.17e3
69.88
  • 69.88
  • 69.29
AEIR
  • AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
9.60e3
  • 9.60e3
  • 1.31e4
  • 1.34e4
67.85
  • 67.85
  • 56.24
  • 54.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
9.79e3
  • 9.79e3
  • 1.08e4
67.23
  • 67.23
  • 63.78
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.12
  • 66.12
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
66.01
  • 66.01
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
66.01
  • 66.01
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.33
  • 65.33
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.03
  • 64.03
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.10e4
  • 1.10e4
63.09
  • 63.09
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.24
  • 62.24
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.90
  • 61.90
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.80
  • 60.80
AEIR
  • AEIR
UBERON:0008904neuromast
  • ZFS:0000033Hatching:Long-pec
1.17e4
  • 1.17e4
60.70
  • 60.70
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.54
  • 60.54
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
59.99
  • 59.99
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.83
  • 58.83
AEIR
  • AEIR
UBERON:2000001Kupffer's vesicle
  • ZFS:0000024Segmentation:5-9 somites
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.85
  • 55.85
AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
55.24
  • 55.24
AEIR
  • AEIR
UBERON:0000004nose
  • ZFS:0000033Hatching:Long-pec
1.40e4
  • 1.40e4
53.10
  • 53.10
AEIR
  • AEIR
ZFA:0001065lateral mesoderm (Danio)
  • ZFS:0000025Segmentation:10-13 somites
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi15 species23 genesCompare expression
Bilateria22 species30 genesCompare expression

Orthology information comes from OMA : ENSDARG00000038024.

Cross-references

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