Gene: nol12 - ENSDARG00000038027 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000038027
Name	nol12
Description	nucleolar protein 12 [Source:ZFIN;Acc:ZDB-GENE-040426-1035]
Organism	Danio rerio (zebrafish)
Synonym(s)	zgc:56457
Orthologs(s)	18 orthologs

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.46e3 1.46e3	95.11 95.11	AEIR AEIR
UBERON:0000992	female gonad	[+] 1 stage UBERON:0000066fully formed stage	1.86e3 1.86e3	93.77 93.77	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	2.17e3 2.17e3 2.33e3	92.75 92.75 92.21	AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages UBERON:0000068embryo stage ZFS:0000029Pharyngula:Prim-5 UBERON:0004707pharyngula stage ZFS:0000033Hatching:Long-pec ZFS:0000037Larval:Day 5	2.32e3 2.32e3 3.22e3 4.03e3 6.61e3 8.42e3	92.25 92.25 89.21 86.50 77.86 71.81	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000015Blastula:Dome ZFS:0000011Blastula:1k-cell	2.65e3 2.65e3 2.67e3	91.13 91.13 91.05	AEIR AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	3.36e3 3.36e3	88.75 88.75	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	3.45e3 3.45e3	88.47 88.47	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	3.49e3 3.49e3	88.31 88.31	AEIR AEIR
UBERON:0002113	kidney	[+] 1 stage UBERON:0000066fully formed stage	3.57e3 3.57e3	88.07 88.07	AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	3.77e3 3.77e3	87.38 87.38	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	4.19e3 4.19e3	85.98 85.98	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	4.36e3 4.36e3	85.41 85.41	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages ZFS:0000036Larval:Day 4 UBERON:0000066fully formed stage	4.65e3 4.65e3 8.78e3	84.42 84.42 70.60	AEIR AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	5.45e3 5.45e3	81.75 81.75	AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	5.77e3 5.77e3	80.68 80.68	AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	5.77e3 5.77e3	80.68 80.68	AEIR AEIR
UBERON:0002548	larva	[+] 2 stages UBERON:0000069larval stage ZFS:0000037Larval:Day 5	6.46e3 6.46e3 8.18e3	78.37 78.37 72.61	AEIR AEIR AEIR
UBERON:0003982	mature ovarian follicle	[+] 1 stage UBERON:0000066fully formed stage	6.54e3 6.54e3	78.10 78.10	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	7.07e3 7.07e3	76.32 76.32	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	7.42e3 7.42e3	75.14 75.14	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	7.48e3 7.48e3	74.95 74.95	AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	7.56e3 7.56e3 8.33e3	74.69 74.69 72.13	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 1 stage UBERON:0000066fully formed stage	1.17e4 1.17e4	60.82 60.82	AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	1.28e4 1.28e4	57.10 57.10	AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	1.70e4 1.70e4	43.00 43.00	AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

RNA-Seq data: Bgee

Sources of raw data:

RNA-Seq data: GEO

Orthologs

Taxon name	Species with orthologs	Gene(s)	Expression comparison	See details
Euteleostomi	18 species Homo sapiens (human) Mus musculus (mouse) Pan troglodytes (chimpanzee) Macaca mulatta (macaque) Rattus norvegicus (rat) Bos taurus (cattle) Sus scrofa (pig) Equus caballus (horse) Oryctolagus cuniculus (rabbit) Canis lupus familiaris (dog) Felis catus (cat) Cavia porcellus (guinea pig) Erinaceus europaeus (hedgehog) Monodelphis domestica (opossum) Ornithorhynchus anatinus (platypus) Gallus gallus (chicken) Anolis carolinensis (green anole) Xenopus tropicalis (western clawed frog)	18 genes ENSG00000273899 NOL12 ENSMUSG00000033099 Nol12 ENSPTRG00000014345 ENSMMUG00000015220 ENSRNOG00000010209 Nol12 ENSBTAG00000015092 ENSSSCG00000021663 ENSECAG00000011050 ENSOCUG00000017013 ENSCAFG00000028770 ENSFCAG00000004273 ENSCPOG00000006270 ENSEEUG00000002597 ENSMODG00000000273 ENSOANG00000005801 ENSGALG00000012410 ENSACAG00000015549 ENSXETG00000015984 nol12	Compare expression	[+]

Orthology information comes from OMA : ENSDARG00000038027.

Cross-references

Ensembl	ENSDARG00000038027 (nol12)
ZFIN	ZDB-GENE-040426-1035 (nol12)
EMBL	BC049449
Uniprot/SWISSPROT	NOL12_DANRE, Q7ZWE7