D. rerio Gene: hbbe3 - ENSDARG00000038147 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038147
Namehbbe3
Descriptionhemoglobin beta embryonic-3 [Source:ZFIN;Acc:ZDB-GENE-980526-287]
OrganismDanio rerio (zebrafish)
Synonym(s)[b]<sub>e3</sub>globin, beta e3 globin, zgc:110736

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreSources
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
96.0
  • 96.0
  • 142
  • 164
  • 1.23e3
  • 2.16e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
308
  • 308
AEIR
  • AEIR
CL:0000562nucleate erythrocyte
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
3.70e3
  • 3.70e3
  • 7.40e3
  • 1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
4.67e3
  • 4.67e3
  • 5.29e3
  • 1.18e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000028Segmentation:26+ somites
8.63e3
  • 8.63e3
  • 1.11e4
  • 1.27e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002390hematopoietic system
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
9.86e3
  • 9.86e3
  • 1.48e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
AEIR
  • AEIR
CL:0000764erythroid lineage cell
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
1.11e4
  • 1.11e4
  • 1.48e4
  • 1.48e4
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006596presumptive blood
  • ZFS:0000027Segmentation:20-25 somites
1.11e4
  • 1.11e4
AEIR
  • AEIR
UBERON:0000926mesoderm
  • ZFS:0000028Segmentation:26+ somites
1.18e4
  • 1.18e4
AEIR
  • AEIR
UBERON:0003061blood island
  • ZFS:0000029Pharyngula:Prim-5
1.23e4
  • 1.23e4
AEIR
  • AEIR
UBERON:0003081lateral plate mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.32e4
  • 1.32e4
AEIR
  • AEIR
UBERON:0004537blood vasculature
  • ZFS:0000027Segmentation:20-25 somites
1.48e4
  • 1.48e4
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation
Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.
Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC090459, CR352324
EnsemblENSDARG00000038147 (hbbe3)
Uniprot/SPTREMBLQ5BLF6, Q5BLF6_DANRE
ZFINZDB-GENE-980526-287 (hbbe3)

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