D. rerio Gene: aldh4a1 - ENSDARG00000038207 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038207
Namealdh4a1
Descriptionaldehyde dehydrogenase 4 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-040426-1179]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:63592
Orthologs(s)20 orthologs
Paralog(s)11 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.09e3
  • 2.09e3
93.01
  • 93.01
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
92.35
  • 92.35
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
2.52e3
  • 2.52e3
  • 1.40e4
  • 1.42e4
91.57
  • 91.57
  • 53.10
  • 52.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.45
  • 91.45
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
2.68e3
  • 2.68e3
91.03
  • 91.03
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
2.88e3
  • 2.88e3
  • 5.24e3
  • 5.37e3
  • 5.72e3
  • 6.81e3
  • 9.68e3
  • 1.00e4
  • 1.08e4
  • 1.10e4
  • 1.32e4
90.37
  • 90.37
  • 82.44
  • 82.02
  • 80.85
  • 77.21
  • 67.60
  • 66.49
  • 63.99
  • 63.22
  • 55.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
3.92e3
  • 3.92e3
  • 6.15e3
86.87
  • 86.87
  • 79.41
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.53e3
  • 4.53e3
84.82
  • 84.82
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.33
  • 84.33
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.80e3
  • 6.80e3
  • 1.13e4
  • 1.22e4
77.25
  • 77.25
  • 62.07
  • 59.22
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.94e3
  • 6.94e3
76.76
  • 76.76
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.06e3
  • 7.06e3
  • 9.59e3
76.37
  • 76.37
  • 67.89
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.18e3
  • 7.18e3
75.95
  • 75.95
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
7.22e3
  • 7.22e3
  • 1.11e4
  • 1.14e4
  • 1.27e4
  • 1.28e4
  • 1.31e4
75.82
  • 75.82
  • 62.69
  • 61.76
  • 57.39
  • 57.10
  • 56.01
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.62e3
  • 7.62e3
74.47
  • 74.47
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
8.37e3
  • 8.37e3
  • 1.39e4
71.99
  • 71.99
  • 53.41
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.68
  • 71.68
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
8.90e3
  • 8.90e3
  • 1.14e4
  • 1.20e4
  • 1.30e4
70.20
  • 70.20
  • 61.72
  • 59.85
  • 56.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.97e3
  • 8.97e3
69.97
  • 69.97
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.00e3
  • 9.00e3
  • 1.27e4
69.87
  • 69.87
  • 57.38
AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.05e3
  • 9.05e3
69.71
  • 69.71
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000106zygote stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
9.34e3
  • 9.34e3
  • 1.05e4
  • 1.13e4
  • 1.15e4
  • 1.15e4
  • 1.21e4
  • 1.22e4
  • 1.22e4
  • 1.23e4
  • 1.24e4
  • 1.26e4
  • 1.27e4
  • 1.28e4
  • 1.29e4
  • 1.32e4
  • 1.37e4
68.74
  • 68.74
  • 64.69
  • 62.32
  • 61.65
  • 61.61
  • 59.38
  • 59.16
  • 59.09
  • 58.82
  • 58.48
  • 57.78
  • 57.58
  • 57.19
  • 56.75
  • 55.72
  • 54.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.93e3
  • 9.93e3
66.76
  • 66.76
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.12
  • 66.12
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.03e4
  • 1.03e4
65.50
  • 65.50
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.07e4
  • 1.07e4
64.08
  • 64.08
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.13e4
  • 1.13e4
  • 1.13e4
  • 1.26e4
  • 1.27e4
  • 1.38e4
62.29
  • 62.29
  • 62.16
  • 57.91
  • 57.46
  • 53.80
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.13e4
  • 1.13e4
62.25
  • 62.25
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.22e4
  • 1.22e4
59.10
  • 59.10
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
  • 1.30e4
56.85
  • 56.85
  • 56.63
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.34e4
  • 1.34e4
55.18
  • 55.18
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi13 species13 genesCompare expression
Bilateria20 species20 genesCompare expression

Orthology information comes from OMA : ENSDARG00000038207.

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Eukaryota11 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000038207.

Cross-references

EnsemblENSDARG00000038207 (aldh4a1)
ZFINZDB-GENE-040426-1179 (aldh4a1)
Uniprot/SPTREMBLF1R9W9, F1R9W9_DANRE

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