D. rerio Gene: sepw2a - ENSDARG00000038228 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038228
Namesepw2a
Descriptionselenoprotein W, 2a [Source:ZFIN;Acc:ZDB-GENE-030428-1]
OrganismDanio rerio (zebrafish)
Synonym(s)cb695, si:busm1-180g5.9, si:dz180g5.9

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
656
  • 656
  • 1.09e3
  • 1.49e4
97.81
  • 97.81
  • 96.35
  • 49.94
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000032Pharyngula:High-pec
699
  • 699
  • 835
  • 2.16e3
  • 8.08e3
  • 1.30e4
  • 1.34e4
97.66
  • 97.66
  • 97.21
  • 92.79
  • 72.95
  • 56.49
  • 54.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
766
  • 766
97.44
  • 97.44
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
777
  • 777
  • 879
  • 918
  • 959
  • 1.21e3
  • 1.21e3
  • 1.24e3
  • 1.35e3
  • 1.39e3
  • 1.40e3
97.40
  • 97.40
  • 97.06
  • 96.93
  • 96.79
  • 95.95
  • 95.94
  • 95.84
  • 95.47
  • 95.36
  • 95.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
888
  • 888
97.03
  • 97.03
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000109gastrula stage
893
  • 893
  • 974
  • 1.02e3
  • 1.68e3
  • 1.70e3
  • 3.11e3
97.01
  • 97.01
  • 96.74
  • 96.58
  • 94.39
  • 94.32
  • 89.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.07e3
  • 1.07e3
96.41
  • 96.41
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.08e3
  • 1.08e3
  • 2.04e3
96.39
  • 96.39
  • 93.16
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.16e3
  • 1.16e3
96.11
  • 96.11
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
1.18e3
  • 1.18e3
  • 1.74e3
  • 3.24e3
  • 3.31e3
  • 5.20e3
96.06
  • 96.06
  • 94.18
  • 89.15
  • 88.92
  • 82.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.23e3
  • 1.23e3
95.87
  • 95.87
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.27e3
  • 1.27e3
  • 1.38e3
  • 1.47e3
  • 1.57e3
  • 1.63e3
  • 1.77e3
  • 1.79e3
  • 1.80e3
  • 1.88e3
  • 1.93e3
  • 2.06e3
  • 2.12e3
  • 2.38e3
  • 2.71e3
  • 1.21e4
  • 1.42e4
  • 1.50e4
95.76
  • 95.76
  • 95.37
  • 95.09
  • 94.75
  • 94.55
  • 94.08
  • 94.00
  • 93.96
  • 93.72
  • 93.54
  • 93.12
  • 92.89
  • 92.04
  • 90.94
  • 59.51
  • 52.43
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
  • 2.33e3
95.75
  • 95.75
  • 92.21
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.30e3
  • 1.30e3
95.64
  • 95.64
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.39e3
  • 1.39e3
  • 1.97e3
95.36
  • 95.36
  • 93.40
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.36
  • 95.36
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.48e3
  • 1.48e3
95.04
  • 95.04
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.51e3
  • 1.51e3
94.96
  • 94.96
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.51e3
  • 1.51e3
94.93
  • 94.93
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.69e3
  • 1.69e3
  • 1.83e3
  • 2.34e3
94.33
  • 94.33
  • 93.86
  • 92.17
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.96e3
  • 1.96e3
93.43
  • 93.43
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
2.05e3
  • 2.05e3
93.15
  • 93.15
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.90
  • 92.90
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.21e3
  • 2.21e3
92.60
  • 92.60
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.53e3
  • 2.53e3
91.54
  • 91.54
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
2.59e3
  • 2.59e3
91.34
  • 91.34
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.04e3
  • 3.04e3
89.81
  • 89.81
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.81e3
  • 3.81e3
87.24
  • 87.24
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
8.79e3
  • 8.79e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 1.14e4
  • 1.20e4
  • 1.23e4
  • 1.25e4
  • 1.25e4
70.57
  • 70.57
  • 69.43
  • 67.48
  • 66.65
  • 61.88
  • 59.98
  • 58.80
  • 58.31
  • 58.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.26e4
  • 1.26e4
  • 1.28e4
57.68
  • 57.68
  • 57.13
AEIR
  • AEIR
  • AEIR
UBERON:0001893telencephalon
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.31e4
  • 1.31e4
  • 1.34e4
  • 1.41e4
56.22
  • 56.22
  • 55.24
  • 52.75
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0005426lens vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000028Segmentation:26+ somites
1.32e4
  • 1.32e4
  • 1.34e4
  • 1.40e4
55.86
  • 55.86
  • 54.97
  • 53.10
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCT573444
EnsemblENSDARG00000038228 (sepw2a)
Uniprot/SPTREMBLE7F9N4, E7F9N4_DANRE, Q802F5, Q802F5_DANRE
ZFINZDB-GENE-030428-1 (sepw2a)

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