D. rerio Gene: zgc:103559 - ENSDARG00000038293 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038293
Namezgc:103559
Descriptionzgc:103559 [Source:ZFIN;Acc:ZDB-GENE-041212-22]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.57e3
  • 1.57e3
  • 9.34e3
94.76
  • 94.76
  • 68.74
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.72e3
  • 8.72e3
70.81
  • 70.81
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.92e3
  • 9.92e3
  • 1.50e4
66.78
  • 66.78
  • 49.89
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.14e4
  • 1.14e4
  • 2.51e4
61.97
  • 61.97
  • 15.89
AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.02
  • 60.02
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.94
  • 54.94
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.01
  • 53.01
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.86
  • 49.86
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.53e4
  • 1.53e4
  • 1.58e4
48.74
  • 48.74
  • 46.97
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.64
  • 45.64
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.69e4
  • 1.69e4
  • 2.77e4
43.33
  • 43.33
  • 7.41
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.72
  • 37.72
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.39
  • 37.39
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.00e4
  • 2.00e4
33.12
  • 33.12
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.41e4
  • 2.41e4
19.39
  • 19.39
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCU467043
EnsemblENSDARG00000038293 (zgc:103559)
Uniprot/SPTREMBLF1RB68, F1RB68_DANRE
ZFINZDB-GENE-041212-22 (zgc:103559)

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