D. rerio Gene: VGLL3 - ENSDARG00000038305 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038305
NameVGLL3
Descriptionvestigial like family member 3 [Source:HGNC Symbol;Acc:HGNC:24327]
OrganismDanio rerio (zebrafish)
Synonym(s)vgl-3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.56e3
  • 2.56e3
91.42
  • 91.42
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
74.39
  • 74.39
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.00e4
  • 1.00e4
66.37
  • 66.37
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.99
  • 62.99
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.25e4
  • 1.25e4
  • 1.45e4
58.16
  • 58.16
  • 51.60
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.73
  • 55.73
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.37e4
  • 1.37e4
54.00
  • 54.00
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.39e4
  • 1.39e4
  • 1.60e4
  • 1.74e4
  • 1.87e4
  • 2.09e4
53.42
  • 53.42
  • 46.47
  • 41.68
  • 37.51
  • 30.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.84
  • 49.84
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.40
  • 48.40
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.65e4
  • 1.65e4
44.89
  • 44.89
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.71
  • 42.71
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.99e4
  • 1.99e4
33.35
  • 33.35
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.04e4
  • 2.04e4
  • 2.05e4
31.61
  • 31.61
  • 31.24
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.16e4
  • 2.16e4
27.73
  • 27.73
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.34e4
  • 2.34e4
21.71
  • 21.71
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCR394536
EnsemblENSDARG00000038305 (VGLL3)
HGNCHGNC:24327 (VGLL3)
Uniprot/SPTREMBLE7FDS8, E7FDS8_DANRE

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