D. rerio Gene: C4A - ENSDARG00000038424 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038424
NameC4A
Descriptionsi:dkey-8k3.2 [Source:ZFIN;Acc:ZDB-GENE-100922-98]
OrganismDanio rerio (zebrafish)
Synonym(s)c4, c4a2, c4a3, c4a4, c4a6, c4b, c4s, co4, cpamd2, rg

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
401
  • 401
98.66
  • 98.66
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
944
  • 944
96.84
  • 96.84
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.23e3
  • 2.23e3
92.54
  • 92.54
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.24e3
  • 2.24e3
92.50
  • 92.50
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.73
  • 89.73
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.13e3
  • 3.13e3
89.52
  • 89.52
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.51e3
  • 3.51e3
  • 1.88e4
88.26
  • 88.26
  • 36.97
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
3.69e3
  • 3.69e3
87.63
  • 87.63
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.19e3
  • 4.19e3
85.98
  • 85.98
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
84.04
  • 84.04
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.07e3
  • 5.07e3
83.04
  • 83.04
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.40e3
  • 5.40e3
  • 1.39e4
81.92
  • 81.92
  • 53.45
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.69e3
  • 6.69e3
77.61
  • 77.61
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
7.85e3
  • 7.85e3
  • 1.04e4
  • 1.23e4
  • 1.28e4
  • 1.30e4
  • 1.45e4
  • 1.48e4
73.72
  • 73.72
  • 65.05
  • 58.74
  • 57.07
  • 56.46
  • 51.40
  • 50.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
9.28e3
  • 9.28e3
68.91
  • 68.91
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
9.84e3
  • 9.84e3
  • 1.09e4
  • 1.11e4
67.06
  • 67.06
  • 63.40
  • 62.88
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • UBERON:0000068embryo stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
1.20e4
  • 1.20e4
  • 1.29e4
  • 1.38e4
  • 1.41e4
  • 1.46e4
  • 1.47e4
  • 1.50e4
  • 1.50e4
  • 1.54e4
  • 1.83e4
59.67
  • 59.67
  • 56.72
  • 53.63
  • 52.92
  • 51.01
  • 50.68
  • 49.92
  • 49.80
  • 48.58
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.53
  • 56.53
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
  • 1.37e4
54.85
  • 54.85
  • 54.11
AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.21
  • 50.21
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
49.97
  • 49.97
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.58e4
  • 1.58e4
47.03
  • 47.03
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.80e4
  • 1.80e4
39.62
  • 39.62
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.48
  • 38.48
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EnsemblENSDARG00000038424 (C4A)
HGNCHGNC:1323 (C4A)
Uniprot/SPTREMBLF1Q6R2, F1Q6R2_DANRE
ZFINZDB-GENE-100922-98 (si:dkey-8k3.2)

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