D. rerio Gene: SPIRE1 (1 to many) - ENSDARG00000038445 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038445
NameSPIRE1 (1 to many)
Descriptionspire-type actin nucleation factor 1 [Source:HGNC Symbol;Acc:HGNC:30622]
OrganismDanio rerio (zebrafish)
Synonym(s)kiaa1135, spir-1
Orthologs(s)16 orthologs
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
5.82e3
  • 5.82e3
80.52
  • 80.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
8.50e3
  • 8.50e3
71.52
  • 71.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.65e3
  • 9.65e3
67.71
  • 67.71
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.30e4
  • 1.30e4
56.51
  • 56.51
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.31e4
  • 1.31e4
  • 1.62e4
56.15
  • 56.15
  • 45.83
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
  • 1.72e4
52.63
  • 52.63
  • 42.34
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.45e4
  • 1.45e4
  • 1.59e4
  • 1.77e4
  • 1.87e4
  • 1.96e4
51.50
  • 51.50
  • 46.88
  • 40.60
  • 37.29
  • 34.51
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.62e4
  • 1.62e4
  • 1.70e4
45.86
  • 45.86
  • 43.15
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.65e4
  • 1.65e4
44.69
  • 44.69
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.60
  • 38.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.85e4
  • 1.85e4
38.06
  • 38.06
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.60
  • 26.60
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
22.11
  • 22.11
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Chordata1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000038445.

Cross-references

EnsemblENSDARG00000038445 (SPIRE1 (1 to many))
HGNCHGNC:30622 (SPIRE1 (1 to many))
Uniprot/SPTREMBLE7FA38, E7FA38_DANRE

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