D. rerio Gene: snap29 - ENSDARG00000038518 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038518
Namesnap29
Descriptionsynaptosomal-associated protein 29 [Source:ZFIN;Acc:ZDB-GENE-041111-226]
OrganismDanio rerio (zebrafish)
Synonym(s)fc84f09, im:7145101, si:dkey-178e17.4, wu:fc84f09

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
2.52e3
  • 2.52e3
  • 2.54e3
  • 2.60e3
  • 3.69e3
  • 4.76e3
91.58
  • 91.58
  • 91.50
  • 91.30
  • 87.63
  • 84.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.73e3
  • 2.73e3
90.86
  • 90.86
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
3.71e3
  • 3.71e3
  • 5.22e3
  • 5.62e3
  • 5.72e3
  • 6.46e3
  • 7.45e3
87.57
  • 87.57
  • 82.53
  • 81.18
  • 80.86
  • 78.39
  • 75.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • ZFS:0000049segmentation
  • UBERON:0000104life cycle
3.87e3
  • 3.87e3
  • 5.37e3
  • 5.94e3
  • 6.09e3
  • 6.72e3
  • 7.05e3
  • 7.23e3
  • 7.35e3
  • 7.50e3
  • 7.89e3
  • 8.17e3
  • 8.28e3
  • 8.48e3
  • 8.86e3
  • 1.48e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
87.04
  • 87.04
  • 82.01
  • 80.11
  • 79.62
  • 77.52
  • 76.39
  • 75.80
  • 75.38
  • 74.90
  • 73.57
  • 72.66
  • 72.29
  • 71.60
  • 70.34
  • 50.61
  • 50.25
  • 49.95
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
4.44e3
  • 4.44e3
  • 7.98e3
85.14
  • 85.14
  • 73.29
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.57e3
  • 4.57e3
84.71
  • 84.71
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.28
  • 84.28
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.81e3
  • 4.81e3
83.89
  • 83.89
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.31e3
  • 5.31e3
82.21
  • 82.21
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.46e3
  • 5.46e3
81.72
  • 81.72
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
5.56e3
  • 5.56e3
  • 7.31e3
  • 7.51e3
  • 7.89e3
81.37
  • 81.37
  • 75.51
  • 74.86
  • 73.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.77e3
  • 5.77e3
80.69
  • 80.69
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
6.41e3
  • 6.41e3
  • 6.71e3
  • 7.13e3
  • 7.37e3
  • 7.63e3
  • 7.80e3
  • 9.13e3
  • 9.82e3
  • 1.00e4
  • 1.25e4
78.55
  • 78.55
  • 77.54
  • 76.13
  • 75.34
  • 74.45
  • 73.87
  • 69.43
  • 67.12
  • 66.38
  • 58.21
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.43e3
  • 6.43e3
78.46
  • 78.46
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.48e3
  • 6.48e3
78.31
  • 78.31
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.61e3
  • 6.61e3
77.87
  • 77.87
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.63e3
  • 6.63e3
77.79
  • 77.79
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.54
  • 77.54
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.26
  • 77.26
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.05e3
  • 7.05e3
76.39
  • 76.39
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.19e3
  • 7.19e3
  • 9.02e3
75.94
  • 75.94
  • 69.79
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
7.21e3
  • 7.21e3
75.86
  • 75.86
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
7.30e3
  • 7.30e3
75.57
  • 75.57
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.49e3
  • 7.49e3
74.94
  • 74.94
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
8.33e3
  • 8.33e3
  • 9.36e3
  • 1.01e4
72.10
  • 72.10
  • 68.65
  • 66.07
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.85e3
  • 8.85e3
70.36
  • 70.36
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
9.82e3
  • 9.82e3
67.13
  • 67.13
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.02e4
  • 1.02e4
65.98
  • 65.98
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
1.04e4
  • 1.04e4
  • 1.17e4
65.22
  • 65.22
  • 60.88
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.18e4
  • 1.18e4
60.33
  • 60.33
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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