D. rerio Gene: sdhc - ENSDARG00000038608 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038608
Namesdhc
Descriptionsuccinate dehydrogenase complex, subunit C, integral membrane protein [Source:ZFIN;Acc:ZDB-GENE-040801-26]
OrganismDanio rerio (zebrafish)
Synonym(s)fa91d04, sdhca, wu:fa91d04, zgc:100898

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
345
  • 345
98.85
  • 98.85
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
445
  • 445
  • 965
98.51
  • 98.51
  • 96.77
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
481
  • 481
98.39
  • 98.39
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
485
  • 485
98.38
  • 98.38
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
499
  • 499
98.33
  • 98.33
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
571
  • 571
98.09
  • 98.09
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
632
  • 632
  • 2.07e3
  • 4.26e3
  • 4.45e3
97.89
  • 97.89
  • 93.09
  • 85.74
  • 85.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
660
  • 660
  • 1.00e3
  • 1.24e3
  • 1.48e3
  • 1.66e3
  • 1.79e3
  • 3.08e3
  • 3.24e3
  • 3.71e3
  • 3.87e3
97.79
  • 97.79
  • 96.64
  • 95.85
  • 95.04
  • 94.45
  • 94.02
  • 89.69
  • 89.17
  • 87.59
  • 87.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
662
  • 662
  • 1.03e3
  • 1.06e3
97.79
  • 97.79
  • 96.57
  • 96.44
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
699
  • 699
97.66
  • 97.66
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
712
  • 712
97.62
  • 97.62
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
742
  • 742
97.52
  • 97.52
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
789
  • 789
97.36
  • 97.36
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
799
  • 799
  • 1.19e3
97.33
  • 97.33
  • 96.03
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
833
  • 833
97.21
  • 97.21
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
847
  • 847
97.17
  • 97.17
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
917
  • 917
96.93
  • 96.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.02e3
  • 1.02e3
  • 1.62e3
96.59
  • 96.59
  • 94.57
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.09e3
  • 1.09e3
96.36
  • 96.36
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000106zygote stage
1.12e3
  • 1.12e3
  • 1.27e3
  • 1.31e3
  • 1.37e3
  • 1.69e3
  • 1.74e3
  • 1.97e3
  • 3.44e3
  • 4.08e3
  • 4.52e3
  • 5.04e3
  • 5.15e3
  • 6.93e3
  • 7.01e3
96.25
  • 96.25
  • 95.74
  • 95.60
  • 95.42
  • 94.35
  • 94.16
  • 93.42
  • 88.49
  • 86.33
  • 84.86
  • 83.13
  • 82.74
  • 76.80
  • 76.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.14e3
  • 1.14e3
96.18
  • 96.18
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.21e3
  • 1.21e3
95.95
  • 95.95
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.26e3
  • 1.26e3
95.80
  • 95.80
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
2.04e3
  • 2.04e3
  • 3.57e3
93.19
  • 93.19
  • 88.06
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
2.70e3
  • 2.70e3
90.95
  • 90.95
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.71e3
  • 3.71e3
87.60
  • 87.60
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
3.84e3
  • 3.84e3
  • 5.02e3
  • 5.74e3
  • 6.10e3
  • 6.55e3
  • 6.79e3
87.13
  • 87.13
  • 83.20
  • 80.79
  • 79.56
  • 78.08
  • 77.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
4.11e3
  • 4.11e3
  • 4.57e3
  • 6.17e3
  • 6.23e3
  • 7.18e3
86.24
  • 86.24
  • 84.72
  • 79.33
  • 79.13
  • 75.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.43e3
  • 4.43e3
85.17
  • 85.17
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
4.87e3
  • 4.87e3
83.69
  • 83.69
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.88
  • 82.88
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.16e3
  • 5.16e3
82.72
  • 82.72
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
5.18e3
  • 5.18e3
82.66
  • 82.66
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.25
  • 82.25
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000018Gastrula:Germ-ring
  • UBERON:0000106zygote stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000015Blastula:Dome
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000026Segmentation:14-19 somites
6.40e3
  • 6.40e3
  • 6.40e3
  • 6.40e3
  • 6.64e3
  • 6.89e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
  • 7.97e3
  • 8.53e3
  • 8.54e3
  • 8.71e3
  • 8.79e3
  • 8.79e3
  • 8.96e3
  • 8.96e3
  • 9.13e3
  • 9.13e3
  • 9.13e3
  • 9.71e3
  • 9.96e3
  • 9.96e3
78.57
  • 78.57
  • 78.57
  • 78.57
  • 77.77
  • 76.92
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 75.00
  • 73.32
  • 71.43
  • 71.41
  • 70.82
  • 70.57
  • 70.57
  • 69.99
  • 69.98
  • 69.43
  • 69.43
  • 69.43
  • 67.48
  • 66.66
  • 66.65
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.68e3
  • 7.68e3
74.30
  • 74.30
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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