D. rerio Gene: pih1d3 - ENSDARG00000038612 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038612
Namepih1d3
DescriptionPIH1 domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040722-2]
OrganismDanio rerio (zebrafish)
Synonym(s)mgc35261l, twister

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
816
  • 816
97.27
  • 97.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.07e3
  • 9.07e3
69.64
  • 69.64
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
9.54e3
  • 9.54e3
68.07
  • 68.07
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
1.00e4
  • 1.00e4
  • 1.17e4
  • 1.20e4
  • 1.24e4
66.37
  • 66.37
  • 60.89
  • 59.96
  • 58.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.04e4
  • 1.04e4
65.30
  • 65.30
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.09e4
  • 1.09e4
63.66
  • 63.66
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.45
  • 60.45
AEIR
  • AEIR
UBERON:0001997olfactory epithelium
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
59.29
  • 59.29
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.26e4
  • 1.26e4
  • 1.30e4
  • 1.48e4
  • 1.56e4
  • 1.57e4
  • 1.63e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.90e4
57.90
  • 57.90
  • 56.61
  • 50.45
  • 47.63
  • 47.38
  • 45.55
  • 40.64
  • 40.54
  • 40.37
  • 36.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.27e4
  • 1.27e4
57.32
  • 57.32
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
57.15
  • 57.15
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.28e4
  • 1.28e4
  • 1.43e4
  • 1.50e4
57.08
  • 57.08
  • 51.99
  • 49.82
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.44e4
  • 1.44e4
51.71
  • 51.71
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.07
  • 50.07
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000104life cycle
  • UBERON:0000106zygote stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
1.50e4
  • 1.50e4
  • 1.56e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.80e4
  • 1.81e4
  • 1.83e4
  • 1.83e4
49.92
  • 49.92
  • 47.88
  • 40.62
  • 40.56
  • 40.38
  • 40.38
  • 40.18
  • 39.85
  • 39.42
  • 38.62
  • 38.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.74
  • 48.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.35
  • 48.35
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.56e4
  • 1.56e4
  • 1.80e4
47.68
  • 47.68
  • 39.86
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.57e4
  • 1.57e4
47.56
  • 47.56
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
  • 2.09e4
46.70
  • 46.70
  • 30.04
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.63e4
  • 1.63e4
45.32
  • 45.32
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.70e4
  • 1.70e4
  • 1.85e4
42.98
  • 42.98
  • 37.97
AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.71e4
  • 1.71e4
42.86
  • 42.86
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.93e4
  • 1.93e4
35.27
  • 35.27
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
2.07e4
  • 2.07e4
30.78
  • 30.78
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.09e4
  • 2.09e4
30.11
  • 30.11
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.13e4
  • 2.13e4
28.74
  • 28.74
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLAY618927, BX005060
EnsemblENSDARG00000038612 (pih1d3)
Uniprot/SPTREMBLQ6IVV7, Q6IVV7_DANRE
ZFINZDB-GENE-040722-2 (pih1d3)

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