D. rerio Gene: tmem55ba - ENSDARG00000038615 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038615
Nametmem55ba
Descriptiontransmembrane protein 55Ba [Source:ZFIN;Acc:ZDB-GENE-051113-312]
OrganismDanio rerio (zebrafish)
Synonym(s)fe11b12, wu:fe11b12, zgc:123304

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.93e3
  • 3.93e3
  • 9.82e3
86.86
  • 86.86
  • 67.13
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000104life cycle
4.22e3
  • 4.22e3
  • 9.57e3
  • 1.45e4
85.86
  • 85.86
  • 67.97
  • 51.33
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
5.15e3
  • 5.15e3
  • 6.17e3
  • 6.58e3
  • 7.54e3
  • 1.04e4
82.74
  • 82.74
  • 79.35
  • 77.98
  • 74.76
  • 65.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
5.36e3
  • 5.36e3
82.04
  • 82.04
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
5.44e3
  • 5.44e3
  • 5.92e3
  • 6.38e3
  • 7.46e3
81.78
  • 81.78
  • 80.19
  • 78.65
  • 75.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.24e3
  • 6.24e3
79.11
  • 79.11
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.27e3
  • 6.27e3
79.01
  • 79.01
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
6.44e3
  • 6.44e3
78.43
  • 78.43
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.86e3
  • 6.86e3
77.04
  • 77.04
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0004707pharyngula stage
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
7.15e3
  • 7.15e3
  • 7.57e3
  • 9.32e3
  • 9.79e3
  • 9.90e3
  • 1.00e4
  • 1.02e4
  • 1.04e4
  • 1.05e4
  • 1.21e4
76.06
  • 76.06
  • 74.66
  • 68.81
  • 67.23
  • 66.86
  • 66.50
  • 65.99
  • 65.34
  • 64.99
  • 59.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000036Larval:Day 4
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
7.37e3
  • 7.37e3
  • 7.95e3
  • 8.95e3
  • 9.48e3
  • 9.63e3
  • 9.68e3
  • 1.03e4
  • 1.04e4
  • 1.04e4
  • 1.05e4
  • 1.12e4
  • 1.13e4
  • 1.21e4
  • 1.41e4
  • 1.49e4
  • 1.49e4
  • 1.50e4
75.33
  • 75.33
  • 73.40
  • 70.05
  • 68.26
  • 67.75
  • 67.58
  • 65.46
  • 65.15
  • 65.05
  • 64.93
  • 62.46
  • 62.11
  • 59.57
  • 52.84
  • 50.25
  • 50.20
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
7.82e3
  • 7.82e3
  • 7.94e3
  • 8.60e3
  • 9.04e3
  • 1.02e4
  • 1.14e4
73.81
  • 73.81
  • 73.42
  • 71.20
  • 69.74
  • 65.94
  • 61.98
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
8.90e3
  • 8.90e3
  • 9.36e3
  • 9.47e3
70.19
  • 70.19
  • 68.65
  • 68.28
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.92e3
  • 8.92e3
70.12
  • 70.12
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
9.04e3
  • 9.04e3
69.73
  • 69.73
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
9.27e3
  • 9.27e3
68.95
  • 68.95
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
9.39e3
  • 9.39e3
68.56
  • 68.56
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.61e3
  • 9.61e3
67.82
  • 67.82
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.77e3
  • 9.77e3
67.28
  • 67.28
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.21
  • 66.21
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.03e4
  • 1.03e4
  • 1.32e4
65.55
  • 65.55
  • 55.77
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.88
  • 64.88
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.05e4
  • 1.05e4
64.73
  • 64.73
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.12e4
  • 1.12e4
62.45
  • 62.45
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.42
  • 58.42
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.26e4
  • 1.26e4
57.68
  • 57.68
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.00
  • 57.00
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.34e4
  • 1.34e4
55.14
  • 55.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.91
  • 54.91
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
  • 1.64e4
53.51
  • 53.51
  • 45.06
AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
50.40
  • 50.40
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.59e4
  • 1.59e4
46.91
  • 46.91
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.12
  • 45.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC108019
EnsemblENSDARG00000038615 (tmem55ba)
Uniprot/SWISSPROTQ32PR0, T55BA_DANRE
ZFINZDB-GENE-051113-312 (tmem55ba)

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