D. rerio Gene: cpt2 - ENSDARG00000038618 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038618
Namecpt2
Descriptioncarnitine palmitoyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6719]
OrganismDanio rerio (zebrafish)
Synonym(s)b0s7w9, wu:fa03e08, wu:fb54a02, zgc:101627
Orthologs(s)25 orthologs
Paralog(s)10 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
1.59e3
  • 1.59e3
94.68
  • 94.68
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.02e3
  • 2.02e3
93.24
  • 93.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.16e3
  • 2.16e3
  • 2.99e3
92.78
  • 92.78
  • 89.98
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.33e3
  • 2.33e3
92.19
  • 92.19
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
3.07e3
  • 3.07e3
89.74
  • 89.74
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.49e3
  • 3.49e3
88.32
  • 88.32
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • UBERON:0004707pharyngula stage
  • UBERON:00072322 cell stage
  • UBERON:00072334 cell stage
  • UBERON:00072368 cell stage
  • ZFS:0000006Cleavage:32-cell
  • ZFS:0000007Cleavage:64-cell
  • ZFS:0000008Blastula:128-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000010Blastula:512-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000012Blastula:High
  • ZFS:0000013Blastula:Oblong
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000005Cleavage:16-cell
  • ZFS:0000015Blastula:Dome
  • UBERON:0000106zygote stage
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
3.73e3
  • 3.73e3
  • 4.36e3
  • 4.59e3
  • 6.22e3
  • 6.54e3
  • 6.64e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.79e3
  • 6.90e3
  • 6.97e3
  • 7.03e3
  • 7.47e3
  • 7.47e3
  • 7.49e3
  • 7.91e3
  • 8.54e3
  • 8.69e3
  • 8.77e3
  • 8.96e3
  • 8.96e3
  • 1.07e4
  • 1.10e4
  • 1.10e4
  • 1.11e4
  • 1.13e4
  • 1.17e4
  • 1.43e4
  • 1.48e4
  • 1.50e4
87.53
  • 87.53
  • 85.42
  • 84.63
  • 79.16
  • 78.12
  • 77.77
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 77.27
  • 76.90
  • 76.66
  • 76.46
  • 74.99
  • 74.99
  • 74.93
  • 73.52
  • 71.42
  • 70.89
  • 70.65
  • 69.99
  • 69.99
  • 64.26
  • 63.28
  • 63.19
  • 62.88
  • 62.13
  • 60.92
  • 51.99
  • 50.61
  • 49.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
4.20e3
  • 4.20e3
  • 6.42e3
85.94
  • 85.94
  • 78.50
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
4.27e3
  • 4.27e3
  • 4.66e3
  • 4.99e3
85.70
  • 85.70
  • 84.40
  • 83.31
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.69e3
  • 4.69e3
84.30
  • 84.30
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.72e3
  • 4.72e3
84.21
  • 84.21
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.91
  • 83.91
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.23e3
  • 5.23e3
82.49
  • 82.49
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.45e3
  • 5.45e3
81.74
  • 81.74
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0004707pharyngula stage
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
6.15e3
  • 6.15e3
  • 7.79e3
  • 8.87e3
  • 9.40e3
  • 9.44e3
  • 1.04e4
  • 1.06e4
  • 1.07e4
  • 1.15e4
  • 1.16e4
79.40
  • 79.40
  • 73.91
  • 70.30
  • 68.53
  • 68.39
  • 65.22
  • 64.50
  • 64.05
  • 61.47
  • 61.32
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
6.19e3
  • 6.19e3
  • 6.60e3
  • 7.17e3
  • 7.49e3
79.28
  • 79.28
  • 77.91
  • 75.99
  • 74.94
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
6.39e3
  • 6.39e3
  • 6.81e3
  • 7.00e3
  • 1.04e4
  • 1.14e4
78.60
  • 78.60
  • 77.19
  • 76.57
  • 65.10
  • 61.86
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.60e3
  • 6.60e3
77.91
  • 77.91
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.74e3
  • 6.74e3
77.43
  • 77.43
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.07e3
  • 7.07e3
76.33
  • 76.33
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.12e3
  • 7.12e3
76.14
  • 76.14
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.21e3
  • 7.21e3
  • 7.77e3
75.85
  • 75.85
  • 74.00
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.10e3
  • 9.10e3
69.51
  • 69.51
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.07
  • 66.07
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.07e4
  • 1.07e4
64.25
  • 64.25
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.08e4
  • 1.08e4
63.81
  • 63.81
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
1.11e4
  • 1.11e4
  • 1.13e4
  • 1.13e4
  • 1.13e4
  • 1.13e4
  • 1.28e4
62.86
  • 62.86
  • 62.25
  • 62.07
  • 62.06
  • 62.02
  • 57.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.17e4
  • 1.17e4
60.78
  • 60.78
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.22e4
  • 1.22e4
  • 1.50e4
59.08
  • 59.08
  • 49.92
AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi18 species18 genesCompare expression
Bilateria25 species25 genesCompare expression

Orthology information comes from OMA : ENSDARG00000038618.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Opisthokonta10 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000038618.

Cross-references

EnsemblENSDARG00000038618 (cpt2)
ZFINZDB-GENE-030131-6719 (cpt2)
EMBLBC085392, BX784023, BX927144
Uniprot/SPTREMBLB0S7W8, B0S7W8_DANRE
Uniprot/SWISSPROTCPT2_DANRE, Q5U3U3

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