D. rerio Gene: alas2 - ENSDARG00000038643 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038643
Namealas2
Descriptionaminolevulinate, delta-, synthase 2 [Source:ZFIN;Acc:ZDB-GENE-001229-1]
OrganismDanio rerio (zebrafish)
Synonym(s)alas-e, cb1063, q6nxc5, sau, sauternes, si:dkey-24f17.4, si:dkey-24f17none
Orthologs(s)22 orthologs
Paralog(s)4 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
287
  • 287
99.04
  • 99.04
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
467
  • 467
98.44
  • 98.44
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
  • ZFS:0000035Larval:Protruding-mouth
950
  • 950
  • 4.11e3
  • 1.21e4
96.82
  • 96.82
  • 86.26
  • 59.59
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.23e3
  • 1.23e3
95.88
  • 95.88
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.43e3
  • 1.43e3
95.20
  • 95.20
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.52e3
  • 1.52e3
94.91
  • 94.91
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.80e3
  • 1.80e3
  • 2.06e3
  • 4.28e3
  • 4.33e3
  • 4.36e3
  • 6.05e3
  • 7.78e3
  • 1.20e4
  • 1.33e4
  • 1.75e4
93.98
  • 93.98
  • 93.10
  • 85.68
  • 85.51
  • 85.41
  • 79.76
  • 73.97
  • 59.66
  • 55.48
  • 41.29
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.12e3
  • 2.12e3
92.91
  • 92.91
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
2.22e3
  • 2.22e3
92.58
  • 92.58
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.89e3
  • 3.89e3
  • 1.58e4
86.97
  • 86.97
  • 46.96
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
4.55e3
  • 4.55e3
84.77
  • 84.77
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • UBERON:0000068embryo stage
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
5.94e3
  • 5.94e3
  • 7.49e3
  • 7.79e3
  • 9.26e3
  • 1.26e4
  • 1.37e4
  • 1.43e4
  • 1.46e4
  • 1.50e4
  • 1.77e4
  • 1.78e4
  • 1.78e4
  • 1.83e4
80.11
  • 80.11
  • 74.94
  • 73.92
  • 69.01
  • 57.68
  • 53.99
  • 52.23
  • 51.12
  • 49.92
  • 40.62
  • 40.56
  • 40.38
  • 38.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
6.08e3
  • 6.08e3
79.63
  • 79.63
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.17e3
  • 6.17e3
79.34
  • 79.34
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
6.19e3
  • 6.19e3
  • 8.69e3
  • 1.25e4
79.29
  • 79.29
  • 70.90
  • 58.23
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.72
  • 78.72
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.32e3
  • 7.32e3
75.50
  • 75.50
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.39e3
  • 7.39e3
  • 9.90e3
75.26
  • 75.26
  • 66.85
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.62e3
  • 7.62e3
74.49
  • 74.49
AEIR
  • AEIR
UBERON:2000033intermediate cell mass of mesoderm
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
8.53e3
  • 8.53e3
  • 8.54e3
  • 8.96e3
  • 1.18e4
  • 1.49e4
71.43
  • 71.43
  • 71.42
  • 69.99
  • 60.50
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.74e3
  • 9.74e3
67.40
  • 67.40
AEIR
  • AEIR
UBERON:0000178blood
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
9.96e3
  • 9.96e3
  • 1.07e4
  • 1.07e4
  • 1.12e4
  • 1.12e4
  • 1.24e4
  • 1.28e4
66.66
  • 66.66
  • 64.27
  • 64.27
  • 62.49
  • 62.48
  • 58.32
  • 57.14
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.24
  • 65.24
AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
1.08e4
  • 1.08e4
  • 1.14e4
  • 1.23e4
  • 1.25e4
  • 1.27e4
63.87
  • 63.87
  • 61.88
  • 58.80
  • 58.31
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.74
  • 62.74
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.02
  • 62.02
AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
1.25e4
  • 1.25e4
58.31
  • 58.31
AEIR
  • AEIR
UBERON:0009910posterior lateral plate mesoderm
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000025Segmentation:10-13 somites
1.28e4
  • 1.28e4
  • 1.49e4
  • 1.49e4
57.14
  • 57.14
  • 50.00
  • 49.99
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:2000083ventral mesoderm
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
1.29e4
  • 1.29e4
  • 1.29e4
  • 1.39e4
  • 1.41e4
56.65
  • 56.65
  • 56.65
  • 53.55
  • 52.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.31e4
  • 1.31e4
  • 1.35e4
56.11
  • 56.11
  • 54.72
AEIR
  • AEIR
  • AEIR
UBERON:0000019camera-type eye
  • UBERON:0000066fully formed stage
1.46e4
  • 1.46e4
51.26
  • 51.26
AEIR
  • AEIR
CL:0000038erythroid progenitor cell
  • ZFS:0000028Segmentation:26+ somites
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
CL:0000037hematopoietic stem cell
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
1.55e4
  • 1.55e4
  • 1.75e4
48.25
  • 48.25
  • 41.42
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.63e4
  • 1.63e4
45.42
  • 45.42
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.66e4
  • 1.66e4
44.50
  • 44.50
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.08
  • 44.08
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.86
  • 43.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi17 species17 genesCompare expression
Bilateria22 species22 genesCompare expression

Orthology information comes from OMA : ENSDARG00000038643.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Deuterostomia1 geneCompare expression
Eukaryota4 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000038643.

Cross-references

EnsemblENSDARG00000038643 (alas2)
ZFINZDB-GENE-001229-1 (alas2)
EMBLAF095747, BC056338, BC067149
Uniprot/SWISSPROTHEM0_DANRE, Q9YHT4

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