D. rerio Gene: tmem53 - ENSDARG00000038789 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038789
Nametmem53
Descriptiontransmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:92204

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.71e3
  • 1.71e3
94.29
  • 94.29
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.99e3
  • 2.99e3
89.98
  • 89.98
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
3.15e3
  • 3.15e3
  • 3.64e3
  • 5.79e3
  • 1.06e4
  • 1.24e4
89.45
  • 89.45
  • 87.82
  • 80.61
  • 64.44
  • 58.54
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
3.45e3
  • 3.45e3
88.46
  • 88.46
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.39e3
  • 4.39e3
85.29
  • 85.29
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.86e3
  • 4.86e3
83.73
  • 83.73
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
80.00
  • 80.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.16e3
  • 6.16e3
79.38
  • 79.38
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
6.24e3
  • 6.24e3
  • 6.41e3
  • 7.51e3
  • 8.63e3
79.10
  • 79.10
  • 78.55
  • 74.85
  • 71.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
6.78e3
  • 6.78e3
77.30
  • 77.30
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000042Juvenile:Days 30-44
  • UBERON:0000066fully formed stage
6.99e3
  • 6.99e3
  • 1.27e4
  • 1.28e4
  • 1.28e4
  • 1.30e4
  • 1.32e4
  • 1.34e4
  • 1.34e4
  • 1.37e4
  • 1.38e4
  • 1.38e4
  • 1.40e4
  • 1.43e4
  • 1.44e4
  • 1.44e4
  • 1.50e4
76.61
  • 76.61
  • 57.42
  • 57.02
  • 57.00
  • 56.47
  • 55.90
  • 55.16
  • 55.00
  • 54.26
  • 53.84
  • 53.67
  • 53.26
  • 52.09
  • 51.70
  • 51.62
  • 49.81
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.08e3
  • 7.08e3
76.31
  • 76.31
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
7.16e3
  • 7.16e3
  • 9.68e3
76.02
  • 76.02
  • 67.58
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.19e3
  • 7.19e3
75.94
  • 75.94
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.49e3
  • 7.49e3
74.93
  • 74.93
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000024Segmentation:5-9 somites
8.08e3
  • 8.08e3
  • 9.03e3
  • 1.04e4
  • 1.04e4
  • 1.05e4
  • 1.24e4
  • 1.34e4
  • 1.37e4
  • 1.38e4
  • 1.44e4
72.93
  • 72.93
  • 69.75
  • 65.32
  • 65.25
  • 64.73
  • 58.48
  • 55.22
  • 54.09
  • 53.91
  • 51.76
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.76
  • 71.76
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.41e3
  • 9.41e3
68.49
  • 68.49
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.00e4
  • 1.00e4
66.44
  • 66.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.13
  • 65.13
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.78
  • 64.78
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.05e4
  • 1.05e4
  • 1.14e4
  • 1.29e4
64.69
  • 64.69
  • 61.95
  • 56.92
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.08e4
  • 1.08e4
  • 1.44e4
63.86
  • 63.86
  • 51.84
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
  • 1.16e4
63.85
  • 63.85
  • 61.19
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.10e4
  • 1.10e4
  • 1.11e4
  • 1.12e4
  • 1.16e4
  • 1.22e4
  • 1.43e4
63.13
  • 63.13
  • 62.77
  • 62.66
  • 61.15
  • 59.04
  • 52.10
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.11e4
  • 1.11e4
63.00
  • 63.00
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.01
  • 62.01
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
  • 1.20e4
61.22
  • 61.22
  • 59.80
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.19e4
  • 1.19e4
60.14
  • 60.14
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.12
  • 60.12
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.38e4
  • 1.38e4
53.80
  • 53.80
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC075937
EnsemblENSDARG00000038789 (tmem53)
Uniprot/SWISSPROTQ6DHN0, TMM53_DANRE
ZFINZDB-GENE-040718-384 (tmem53)

Do not show this banner again