D. rerio Gene: zgc:113531 - ENSDARG00000038794 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038794
Namezgc:113531
Descriptionzgc:113531 [Source:ZFIN;Acc:ZDB-GENE-050320-52]
OrganismDanio rerio (zebrafish)
Synonym(s)im:7142574

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.02e3
  • 5.02e3
83.19
  • 83.19
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
6.59e3
  • 6.59e3
  • 8.28e3
77.93
  • 77.93
  • 72.27
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.71e3
  • 6.71e3
77.52
  • 77.52
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.73e3
  • 6.73e3
77.46
  • 77.46
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
7.08e3
  • 7.08e3
  • 8.54e3
  • 9.27e3
  • 9.40e3
  • 1.09e4
76.31
  • 76.31
  • 71.40
  • 68.97
  • 68.54
  • 63.49
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.53
  • 74.53
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.52
  • 74.52
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
7.67e3
  • 7.67e3
  • 1.88e4
74.32
  • 74.32
  • 37.13
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.61
  • 69.61
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.25
  • 67.25
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.10e4
  • 1.10e4
  • 1.17e4
63.15
  • 63.15
  • 60.92
AEIR
  • AEIR
  • AEIR
UBERON:0002240spinal cord
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.15e4
  • 1.15e4
  • 1.17e4
  • 1.18e4
  • 1.22e4
  • 1.23e4
  • 1.27e4
  • 1.27e4
61.34
  • 61.34
  • 60.68
  • 60.50
  • 59.06
  • 58.80
  • 57.47
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001049neural tube
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
1.17e4
  • 1.17e4
  • 1.20e4
  • 1.27e4
  • 1.27e4
60.84
  • 60.84
  • 59.98
  • 57.47
  • 57.47
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.08
  • 60.08
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.36
  • 54.36
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.10
  • 54.10
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.50
  • 53.50
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.47e4
  • 1.47e4
50.76
  • 50.76
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.14
  • 50.14
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.71
  • 39.71
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
2.17e4
  • 2.17e4
27.27
  • 27.27
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX537271
EnsemblENSDARG00000038794 (zgc:113531)
Uniprot/SPTREMBLA8WHY5, A8WHY5_DANRE
ZFINZDB-GENE-050320-52 (zgc:113531)

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