D. rerio Gene: mrc1b - ENSDARG00000038822 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038822
Namemrc1b
Descriptionmannose receptor, C type 1b [Source:ZFIN;Acc:ZDB-GENE-070705-13]
OrganismDanio rerio (zebrafish)
Synonym(s)mrc1, si:ch211-106h4.2

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
411
  • 411
98.63
  • 98.63
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
916
  • 916
96.94
  • 96.94
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.15e3
  • 1.15e3
96.16
  • 96.16
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.27e3
  • 1.27e3
95.74
  • 95.74
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
93.08
  • 93.08
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.21e3
  • 3.21e3
  • 1.56e4
89.27
  • 89.27
  • 47.90
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
4.68e3
  • 4.68e3
84.34
  • 84.34
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
5.11e3
  • 5.11e3
82.90
  • 82.90
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.30e3
  • 5.30e3
82.24
  • 82.24
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
5.44e3
  • 5.44e3
  • 1.49e4
81.80
  • 81.80
  • 50.19
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
6.59e3
  • 6.59e3
77.93
  • 77.93
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.89e3
  • 6.89e3
76.93
  • 76.93
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
7.23e3
  • 7.23e3
75.81
  • 75.81
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.34e3
  • 9.34e3
68.72
  • 68.72
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.96
  • 65.96
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.41
  • 59.41
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.93
  • 54.93
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.54
  • 54.54
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
1.55e4
  • 1.55e4
  • 1.55e4
  • 1.93e4
  • 2.07e4
48.25
  • 48.25
  • 48.01
  • 35.30
  • 30.60
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.56e4
  • 1.56e4
  • 1.80e4
47.66
  • 47.66
  • 39.71
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.72e4
  • 1.72e4
42.49
  • 42.49
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.94e4
  • 1.94e4
34.96
  • 34.96
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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