D. rerio Gene: TRAPPC8 - ENSDARG00000038866 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038866
NameTRAPPC8
Descriptiontrafficking protein particle complex 8 [Source:HGNC Symbol;Acc:HGNC:29169]
OrganismDanio rerio (zebrafish)
Synonym(s)gsg1, hst2706, kiaa1012, trs85

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
4.55e3
  • 4.55e3
  • 6.65e3
  • 9.02e3
  • 9.22e3
84.77
  • 84.77
  • 77.74
  • 69.80
  • 69.13
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000021Gastrula:90%-epiboly
  • UBERON:0000106zygote stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
4.93e3
  • 4.93e3
  • 6.41e3
  • 6.42e3
  • 6.86e3
  • 6.89e3
  • 7.02e3
  • 7.41e3
  • 7.57e3
  • 7.69e3
  • 8.48e3
  • 8.57e3
  • 8.67e3
  • 9.34e3
  • 9.48e3
83.50
  • 83.50
  • 78.52
  • 78.51
  • 77.02
  • 76.92
  • 76.49
  • 75.18
  • 74.66
  • 74.24
  • 71.62
  • 71.31
  • 70.97
  • 68.74
  • 68.27
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
5.14e3
  • 5.14e3
  • 5.75e3
  • 6.79e3
  • 8.48e3
  • 8.65e3
82.80
  • 82.80
  • 80.74
  • 77.26
  • 71.62
  • 71.04
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
6.10e3
  • 6.10e3
79.57
  • 79.57
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.21e3
  • 7.21e3
75.87
  • 75.87
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
7.45e3
  • 7.45e3
  • 9.20e3
75.05
  • 75.05
  • 69.20
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
7.48e3
  • 7.48e3
74.95
  • 74.95
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
7.65e3
  • 7.65e3
  • 8.83e3
74.37
  • 74.37
  • 70.45
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000019Gastrula:Shield
7.75e3
  • 7.75e3
  • 8.97e3
  • 9.68e3
  • 9.69e3
  • 1.08e4
  • 1.11e4
74.05
  • 74.05
  • 69.97
  • 67.58
  • 67.55
  • 63.74
  • 62.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.86e3
  • 7.86e3
73.67
  • 73.67
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
7.92e3
  • 7.92e3
73.49
  • 73.49
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.96e3
  • 7.96e3
73.34
  • 73.34
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.02e3
  • 8.02e3
73.15
  • 73.15
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
8.31e3
  • 8.31e3
72.17
  • 72.17
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.38e3
  • 8.38e3
71.95
  • 71.95
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
8.38e3
  • 8.38e3
71.94
  • 71.94
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.59e3
  • 8.59e3
71.23
  • 71.23
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.71e3
  • 8.71e3
70.84
  • 70.84
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
8.87e3
  • 8.87e3
  • 8.98e3
  • 9.00e3
  • 9.28e3
  • 9.34e3
  • 9.44e3
  • 9.95e3
  • 1.03e4
  • 1.06e4
  • 1.08e4
70.29
  • 70.29
  • 69.93
  • 69.88
  • 68.94
  • 68.73
  • 68.41
  • 66.69
  • 65.55
  • 64.42
  • 63.78
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000035Larval:Protruding-mouth
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.94e3
  • 8.94e3
  • 9.05e3
  • 9.26e3
70.08
  • 70.08
  • 69.69
  • 68.98
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.26e3
  • 9.26e3
68.98
  • 68.98
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
9.29e3
  • 9.29e3
68.89
  • 68.89
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.36e3
  • 9.36e3
68.66
  • 68.66
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
9.45e3
  • 9.45e3
  • 9.68e3
68.35
  • 68.35
  • 67.60
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.03e4
  • 1.03e4
65.59
  • 65.59
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.98
  • 64.98
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.11e4
  • 1.11e4
62.95
  • 62.95
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.11e4
  • 1.11e4
62.87
  • 62.87
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.39
  • 56.39
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
44.13
  • 44.13
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.73e4
  • 1.73e4
42.12
  • 42.12
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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