D. rerio Gene: fdx1b - ENSDARG00000038956 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038956
Namefdx1b
Descriptionferredoxin 1b [Source:ZFIN;Acc:ZDB-GENE-060526-382]
OrganismDanio rerio (zebrafish)
Synonym(s)si:rp71-5c20.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.01e3
  • 2.01e3
93.26
  • 93.26
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
3.26e3
  • 3.26e3
89.10
  • 89.10
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.97e3
  • 7.97e3
73.31
  • 73.31
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.19e4
  • 1.19e4
  • 1.21e4
60.13
  • 60.13
  • 59.47
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.29e4
  • 1.29e4
56.77
  • 56.77
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.17
  • 50.17
AEIR
  • AEIR
UBERON:0006856interrenal gland
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.55e4
  • 1.55e4
  • 1.64e4
48.26
  • 48.26
  • 45.01
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.68e4
  • 1.68e4
  • 1.83e4
43.66
  • 43.66
  • 38.88
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.68
  • 41.68
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.27
  • 41.27
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.76e4
  • 1.76e4
41.21
  • 41.21
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
1.83e4
  • 1.83e4
  • 1.93e4
  • 1.96e4
  • 1.98e4
  • 2.11e4
38.83
  • 38.83
  • 35.43
  • 34.50
  • 33.82
  • 29.20
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.03
  • 35.03
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.03
  • 29.03
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.32e4
  • 2.32e4
22.29
  • 22.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.37e4
  • 2.37e4
20.72
  • 20.72
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBX465863
EnsemblENSDARG00000038956 (fdx1b)
Uniprot/SPTREMBLA2BGD1, A2BGD1_DANRE
ZFINZDB-GENE-060526-382 (fdx1b)

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