D. rerio Gene: VOPP1 (1 to many) - ENSDARG00000038979 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038979
NameVOPP1 (1 to many)
Descriptionsi:dkey-24c2.9 [Source:ZFIN;Acc:ZDB-GENE-070912-476]
OrganismDanio rerio (zebrafish)
Synonym(s)dkfzp564k0822, ecop, flj20532, gasp

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
9.41e3
  • 9.41e3
  • 1.49e4
68.48
  • 68.48
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.28e4
  • 1.28e4
57.30
  • 57.30
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
  • 1.63e4
48.99
  • 48.99
  • 45.50
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.85
  • 45.85
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.18
  • 45.18
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.88e4
  • 1.88e4
  • 2.21e4
  • 2.77e4
37.08
  • 37.08
  • 25.93
  • 7.41
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.71
  • 36.71
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
2.00e4
  • 2.00e4
  • 2.26e4
33.20
  • 33.20
  • 24.30
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.67
  • 32.67
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.11e4
  • 2.11e4
29.28
  • 29.28
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBX649335
EnsemblENSDARG00000038979 (VOPP1 (1 to many))
HGNCHGNC:34518 (VOPP1 (1 to many))
Uniprot/SPTREMBLF1RB52, F1RB52_DANRE
ZFINZDB-GENE-070912-476 (si:dkey-24c2.9)

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