D. rerio Gene: zgc:153615 - ENSDARG00000038981 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000038981
Namezgc:153615
Descriptionzgc:153615 [Source:ZFIN;Acc:ZDB-GENE-061110-79]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
589
  • 589
  • 1.49e4
98.03
  • 98.03
  • 49.94
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
2.48e3
  • 2.48e3
  • 2.81e3
91.70
  • 91.70
  • 90.59
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
3.04e3
  • 3.04e3
  • 8.55e3
  • 1.21e4
  • 1.40e4
  • 1.41e4
89.83
  • 89.83
  • 71.38
  • 59.65
  • 53.07
  • 52.89
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
4.43e3
  • 4.43e3
85.17
  • 85.17
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
4.93e3
  • 4.93e3
  • 1.09e4
83.48
  • 83.48
  • 63.46
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.83e3
  • 5.83e3
80.48
  • 80.48
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.80
  • 64.80
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.31e4
  • 1.31e4
56.26
  • 56.26
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.38e4
  • 1.38e4
53.63
  • 53.63
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.69e4
  • 1.69e4
43.35
  • 43.35
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.99
  • 36.99
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.10e4
  • 2.10e4
29.67
  • 29.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.12e4
  • 2.12e4
29.06
  • 29.06
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLCABZ01069745, CABZ01069746, CABZ01069747
EnsemblENSDARG00000038981 (zgc:153615)
Uniprot/SPTREMBLF1QGH1, F1QGH1_DANRE
ZFINZDB-GENE-061110-79 (zgc:153615)

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