D. rerio Gene: st3gal7 - ENSDARG00000039064 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039064
Namest3gal7
DescriptionST3 beta-galactoside alpha-2,3-sialyltransferase 7 [Source:ZFIN;Acc:ZDB-GENE-060322-2]
OrganismDanio rerio (zebrafish)
Synonym(s)siat5-r, siat5-related, st3gal5-r2, st3gal5l, st3galv-2, st3galv.2, wu:fb60h07, zgc:153853, zgc:153853gn

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
  • ZFS:0000038Larval:Day 6
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
1.46e3
  • 1.46e3
  • 9.96e3
  • 1.12e4
  • 1.21e4
95.12
  • 95.12
  • 66.67
  • 62.49
  • 59.50
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000038Larval:Day 6
1.74e3
  • 1.74e3
  • 1.24e4
  • 1.49e4
94.17
  • 94.17
  • 58.33
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.94e3
  • 2.94e3
90.14
  • 90.14
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.47e3
  • 5.47e3
81.70
  • 81.70
AEIR
  • AEIR
UBERON:0000080mesonephros
  • ZFS:0000038Larval:Day 6
7.47e3
  • 7.47e3
75.00
  • 75.00
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
66.73
  • 66.73
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.78
  • 64.78
AEIR
  • AEIR
UBERON:0003922pancreatic epithelial bud
  • ZFS:0000031Pharyngula:Prim-25
1.09e4
  • 1.09e4
63.63
  • 63.63
AEIR
  • AEIR
UBERON:0002120pronephros
  • ZFS:0000035Larval:Protruding-mouth
1.12e4
  • 1.12e4
62.50
  • 62.50
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.13e4
  • 1.13e4
  • 1.23e4
  • 1.28e4
  • 1.38e4
  • 1.51e4
62.13
  • 62.13
  • 58.66
  • 57.24
  • 53.72
  • 49.58
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.65
  • 58.65
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.25e4
  • 1.25e4
  • 1.60e4
58.18
  • 58.18
  • 46.43
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000029Pharyngula:Prim-5
1.31e4
  • 1.31e4
  • 1.34e4
56.23
  • 56.23
  • 54.97
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.45e4
  • 1.45e4
51.59
  • 51.59
AEIR
  • AEIR
UBERON:0007298pronephric proximal convoluted tubule
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0009622pronephric proximal straight tubule
  • ZFS:0000031Pharyngula:Prim-25
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0012463cloacal lumen
  • ZFS:0000038Larval:Day 6
1.49e4
  • 1.49e4
50.00
  • 50.00
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.64
  • 47.64
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.69e4
  • 1.69e4
43.54
  • 43.54
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.72e4
  • 1.72e4
42.26
  • 42.26
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.89e4
  • 1.89e4
  • 2.08e4
36.70
  • 36.70
  • 30.35
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.98e4
  • 1.98e4
  • 2.09e4
33.59
  • 33.59
  • 29.93
AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
23.13
  • 23.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC124750, BX294129
EnsemblENSDARG00000039064 (st3gal7)
Uniprot/SPTREMBLF1QMF4, F1QMF4_DANRE, Q08BF4, Q08BF4_DANRE
ZFINZDB-GENE-060322-2 (st3gal7)

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