D. rerio Gene: ctslb - ENSDARG00000039173 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039173
Namectslb
Descriptioncathepsin Lb [Source:ZFIN;Acc:ZDB-GENE-980526-285]
OrganismDanio rerio (zebrafish)
Synonym(s)cathepsin l, catl, cb15, cstlb, ctsl, ctsl1b, hatching gland 1, hgg1, wu:fb30g09
Orthologs(s)1 orthologs
Paralog(s)24 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
166
  • 166
  • 225
  • 355
  • 1.08e4
  • 2.47e4
99.45
  • 99.45
  • 99.25
  • 98.81
  • 63.72
  • 17.45
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
740
  • 740
97.53
  • 97.53
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.35e3
  • 1.35e3
95.47
  • 95.47
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000068embryo stage
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000104life cycle
  • ZFS:0000049segmentation
  • ZFS:0000040Larval:Days 14-20
4.11e3
  • 4.11e3
  • 7.29e3
  • 8.50e3
  • 1.12e4
  • 1.45e4
86.24
  • 86.24
  • 75.59
  • 71.52
  • 62.46
  • 51.57
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001846internal ear
  • UBERON:0000068embryo stage
8.86e3
  • 8.86e3
70.32
  • 70.32
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
9.22e3
  • 9.22e3
69.12
  • 69.12
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000036Larval:Day 4
1.15e4
  • 1.15e4
  • 1.56e4
61.51
  • 61.51
  • 47.87
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.33e4
  • 2.33e4
21.86
  • 21.86
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Orthologs

Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Bilateria1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000039173.

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Clupeocephala7 genesCompare expression
Vertebrata13 genesCompare expression
Deuterostomia14 genesCompare expression
Bilateria16 genesCompare expression
Opisthokonta18 genesCompare expression
Eukaryota24 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000039173.

Cross-references

EnsemblENSDARG00000039173 (ctslb)
ZFINZDB-GENE-980526-285 (ctslb)
EMBLBX465840
Uniprot/SPTREMBLF1R7B3, F1R7B3_DANRE

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