D. rerio Gene: orc1 - ENSDARG00000039217 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039217
Nameorc1
Descriptionorigin recognition complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6960]
OrganismDanio rerio (zebrafish)
Synonym(s)orc1l, wu:fa11h08, zgc:55976

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
329
  • 329
98.90
  • 98.90
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
387
  • 387
98.71
  • 98.71
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • UBERON:0000106zygote stage
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000068embryo stage
  • UBERON:0000104life cycle
661
  • 661
  • 3.56e3
  • 5.57e3
  • 5.64e3
  • 5.87e3
  • 6.54e3
  • 6.61e3
  • 6.95e3
  • 6.98e3
  • 7.30e3
  • 8.31e3
  • 8.46e3
  • 9.22e3
  • 1.13e4
  • 1.37e4
  • 1.42e4
  • 1.46e4
  • 1.47e4
97.79
  • 97.79
  • 88.10
  • 81.34
  • 81.10
  • 80.35
  • 78.10
  • 77.88
  • 76.73
  • 76.63
  • 75.55
  • 72.17
  • 71.69
  • 69.14
  • 62.16
  • 54.18
  • 52.43
  • 51.01
  • 50.90
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000014Blastula:Sphere
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
803
  • 803
  • 2.44e3
  • 2.47e3
  • 2.76e3
  • 3.74e3
97.31
  • 97.31
  • 91.85
  • 91.73
  • 90.77
  • 87.48
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.13e3
  • 1.13e3
96.21
  • 96.21
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.64e3
  • 1.64e3
94.51
  • 94.51
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
2.51e3
  • 2.51e3
91.59
  • 91.59
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
4.21e3
  • 4.21e3
  • 4.33e3
  • 5.75e3
  • 8.21e3
  • 8.49e3
  • 8.84e3
85.92
  • 85.92
  • 85.50
  • 80.76
  • 72.51
  • 71.57
  • 70.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000037Larval:Day 5
4.54e3
  • 4.54e3
  • 5.18e3
  • 5.25e3
  • 6.97e3
  • 7.01e3
  • 7.80e3
  • 8.10e3
  • 9.10e3
  • 9.30e3
  • 1.59e4
84.81
  • 84.81
  • 82.66
  • 82.44
  • 76.68
  • 76.52
  • 73.88
  • 72.87
  • 69.52
  • 68.86
  • 46.72
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000465material anatomical entity
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000019Gastrula:Shield
4.60e3
  • 4.60e3
  • 6.15e3
  • 6.64e3
  • 6.72e3
  • 7.03e3
  • 7.12e3
  • 7.47e3
  • 7.47e3
  • 7.47e3
84.61
  • 84.61
  • 79.40
  • 77.77
  • 77.49
  • 76.46
  • 76.18
  • 74.99
  • 74.99
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
4.76e3
  • 4.76e3
  • 8.65e3
84.08
  • 84.08
  • 71.02
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.80e3
  • 4.80e3
83.94
  • 83.94
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
5.08e3
  • 5.08e3
82.99
  • 82.99
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.34e3
  • 5.34e3
  • 1.40e4
82.13
  • 82.13
  • 53.28
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.35e3
  • 5.35e3
82.09
  • 82.09
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
5.55e3
  • 5.55e3
81.43
  • 81.43
AEIR
  • AEIR
UBERON:2000098proliferative region
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
5.60e3
  • 5.60e3
  • 6.64e3
  • 6.64e3
  • 6.64e3
  • 7.47e3
  • 9.96e3
  • 1.05e4
  • 1.05e4
81.25
  • 81.25
  • 77.77
  • 77.77
  • 77.77
  • 74.99
  • 66.66
  • 64.99
  • 64.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.39e3
  • 6.39e3
78.59
  • 78.59
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.53e3
  • 6.53e3
78.12
  • 78.12
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
7.03e3
  • 7.03e3
76.47
  • 76.47
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.24e3
  • 7.24e3
75.75
  • 75.75
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
7.40e3
  • 7.40e3
75.21
  • 75.21
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
8.00e3
  • 8.00e3
73.21
  • 73.21
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.69e3
  • 8.69e3
70.92
  • 70.92
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.50e3
  • 9.50e3
  • 1.81e4
68.19
  • 68.19
  • 39.23
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000035Larval:Protruding-mouth
1.13e4
  • 1.13e4
  • 1.23e4
  • 1.31e4
62.19
  • 62.19
  • 58.96
  • 56.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
60.46
  • 60.46
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.97
  • 59.97
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
  • 1.25e4
58.42
  • 58.42
  • 58.31
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.35e4
  • 1.35e4
54.79
  • 54.79
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.40e4
  • 1.40e4
53.20
  • 53.20
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
  • 2.15e4
52.19
  • 52.19
  • 28.11
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.90
  • 47.90
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.62e4
  • 1.62e4
45.87
  • 45.87
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

Do not show this banner again