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D. rerio Gene: emc4 - ENSDARG00000039268 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039268
Nameemc4
DescriptionER membrane protein complex subunit 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1891]
OrganismDanio rerio (zebrafish)
Synonym(s)tmem85, zgc:77852
Paralog(s)1 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
112
  • 112
99.63
  • 99.63
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
164
  • 164
99.46
  • 99.46
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
208
  • 208
  • 966
99.31
  • 99.31
  • 96.77
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
306
  • 306
  • 343
98.98
  • 98.98
  • 98.85
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
318
  • 318
  • 1.15e3
98.94
  • 98.94
  • 96.15
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
356
  • 356
98.81
  • 98.81
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
419
  • 419
  • 3.65e3
98.60
  • 98.60
  • 87.79
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
420
  • 420
  • 453
98.60
  • 98.60
  • 98.49
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
432
  • 432
98.56
  • 98.56
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
441
  • 441
98.53
  • 98.53
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
476
  • 476
  • 539
  • 1.02e3
  • 1.14e3
  • 1.48e3
98.41
  • 98.41
  • 98.20
  • 96.60
  • 96.20
  • 95.05
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
492
  • 492
98.36
  • 98.36
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
531
  • 531
98.23
  • 98.23
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
552
  • 552
98.15
  • 98.15
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
579
  • 579
98.06
  • 98.06
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
598
  • 598
98.00
  • 98.00
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
645
  • 645
97.84
  • 97.84
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
652
  • 652
97.82
  • 97.82
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
663
  • 663
97.78
  • 97.78
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.74e3
  • 1.74e3
94.17
  • 94.17
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.90e3
  • 2.90e3
90.29
  • 90.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
3.00e3
  • 3.00e3
89.96
  • 89.96
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.92
  • 82.92
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.15e4
  • 1.15e4
61.53
  • 61.53
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.54
  • 46.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Paralogs (same species)

Taxon nameGene(s)Expression comparisonSee details
Bilateria1 geneCompare expression

Paralogy information comes from OMA : ENSDARG00000039268.

Cross-references

EnsemblENSDARG00000039268 (emc4)
ZFINZDB-GENE-040426-1891 (emc4)
EMBLCU905505
Uniprot/SPTREMBLF1Q9Z0, F1Q9Z0_DANRE

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