D. rerio Gene: gadd45gip1 - ENSDARG00000039338 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039338
Namegadd45gip1
Descriptiongrowth arrest and DNA-damage-inducible, gamma interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-282]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-194e13.6
Orthologs(s)12 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.84e3
  • 1.84e3
93.86
  • 93.86
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.03e3
  • 2.03e3
  • 2.95e3
93.22
  • 93.22
  • 90.13
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.06e3
  • 2.06e3
93.10
  • 93.10
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
2.38e3
  • 2.38e3
  • 3.16e3
  • 4.09e3
  • 4.43e3
  • 4.55e3
  • 4.56e3
  • 4.82e3
  • 4.92e3
  • 6.37e3
  • 9.65e3
92.04
  • 92.04
  • 89.42
  • 86.30
  • 85.18
  • 84.77
  • 84.74
  • 83.87
  • 83.53
  • 78.68
  • 67.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
2.38e3
  • 2.38e3
  • 3.90e3
  • 5.01e3
  • 7.19e3
  • 7.95e3
92.03
  • 92.03
  • 86.93
  • 83.23
  • 75.94
  • 73.37
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
3.09e3
  • 3.09e3
  • 3.18e3
  • 3.79e3
  • 5.69e3
  • 6.14e3
  • 6.31e3
89.66
  • 89.66
  • 89.35
  • 87.31
  • 80.95
  • 79.43
  • 78.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.09e3
  • 3.09e3
  • 7.10e3
89.64
  • 89.64
  • 76.23
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
3.47e3
  • 3.47e3
88.37
  • 88.37
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
3.98e3
  • 3.98e3
86.68
  • 86.68
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
  • UBERON:0000106zygote stage
4.04e3
  • 4.04e3
  • 4.22e3
  • 4.37e3
  • 4.49e3
  • 4.50e3
  • 4.57e3
  • 4.71e3
  • 4.93e3
  • 5.00e3
  • 5.19e3
  • 5.30e3
  • 5.33e3
  • 6.29e3
  • 8.47e3
86.47
  • 86.47
  • 85.89
  • 85.37
  • 84.98
  • 84.94
  • 84.69
  • 84.23
  • 83.48
  • 83.27
  • 82.61
  • 82.26
  • 82.16
  • 78.93
  • 71.64
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
4.24e3
  • 4.24e3
85.81
  • 85.81
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.29e3
  • 4.29e3
85.65
  • 85.65
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
4.48e3
  • 4.48e3
85.01
  • 85.01
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
4.49e3
  • 4.49e3
  • 5.36e3
  • 7.04e3
84.97
  • 84.97
  • 82.06
  • 76.45
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.74
  • 84.74
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
4.56e3
  • 4.56e3
84.73
  • 84.73
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
4.66e3
  • 4.66e3
84.39
  • 84.39
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
4.93e3
  • 4.93e3
83.51
  • 83.51
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
5.10e3
  • 5.10e3
82.94
  • 82.94
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
5.22e3
  • 5.22e3
  • 5.66e3
82.51
  • 82.51
  • 81.04
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.42e3
  • 5.42e3
81.87
  • 81.87
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
5.42e3
  • 5.42e3
81.84
  • 81.84
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.86e3
  • 5.86e3
80.36
  • 80.36
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.92e3
  • 5.92e3
80.18
  • 80.18
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.00e3
  • 6.00e3
79.91
  • 79.91
AEIR
  • AEIR
UBERON:0000966retina
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
6.34e3
  • 6.34e3
  • 7.49e3
  • 9.38e3
  • 1.40e4
78.78
  • 78.78
  • 74.92
  • 68.61
  • 53.26
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
6.64e3
  • 6.64e3
77.75
  • 77.75
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
6.76e3
  • 6.76e3
77.36
  • 77.36
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.44e3
  • 7.44e3
75.09
  • 75.09
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
7.67e3
  • 7.67e3
74.33
  • 74.33
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.50e3
  • 8.50e3
71.56
  • 71.56
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
8.52e3
  • 8.52e3
  • 8.58e3
71.46
  • 71.46
  • 71.29
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
9.09e3
  • 9.09e3
69.55
  • 69.55
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.52
  • 64.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Orthologs

Cross-references

EnsemblENSDARG00000039338 (gadd45gip1)
ZFINZDB-GENE-091204-282 (gadd45gip1)
Uniprot/SPTREMBLF1QAF2, F1QAF2_DANRE

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