D. rerio Gene: ahcyl2 - ENSDARG00000039343 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039343
Nameahcyl2
Descriptionadenosylhomocysteinase-like 2 [Source:ZFIN;Acc:ZDB-GENE-040115-5]
OrganismDanio rerio (zebrafish)
Synonym(s)f1qfk1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
931
  • 931
  • 6.11e3
  • 7.83e3
  • 8.32e3
96.89
  • 96.89
  • 79.55
  • 73.79
  • 72.16
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
978
  • 978
96.73
  • 96.73
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000014Blastula:Sphere
1.49e3
  • 1.49e3
  • 1.98e3
  • 3.67e3
  • 5.25e3
  • 6.18e3
95.01
  • 95.01
  • 93.37
  • 87.71
  • 82.44
  • 79.31
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
1.81e3
  • 1.81e3
  • 6.79e3
93.95
  • 93.95
  • 77.28
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • UBERON:0000109gastrula stage
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
2.03e3
  • 2.03e3
  • 3.44e3
  • 5.13e3
  • 6.70e3
  • 6.99e3
  • 7.85e3
93.21
  • 93.21
  • 88.49
  • 82.84
  • 77.58
  • 76.61
  • 73.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
2.13e3
  • 2.13e3
92.88
  • 92.88
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
2.19e3
  • 2.19e3
92.67
  • 92.67
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.50e3
  • 2.50e3
  • 5.75e3
91.62
  • 91.62
  • 80.76
AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
2.82e3
  • 2.82e3
90.54
  • 90.54
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
2.89e3
  • 2.89e3
  • 3.97e3
  • 4.00e3
  • 4.17e3
  • 4.25e3
  • 6.43e3
  • 7.12e3
  • 7.16e3
  • 7.83e3
  • 8.03e3
90.32
  • 90.32
  • 86.71
  • 86.60
  • 86.03
  • 85.77
  • 78.47
  • 76.15
  • 76.04
  • 73.78
  • 73.11
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.60e3
  • 3.60e3
  • 5.48e3
  • 5.50e3
87.96
  • 87.96
  • 81.66
  • 81.58
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000037Larval:Day 5
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • UBERON:0000106zygote stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000018Gastrula:Germ-ring
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
3.63e3
  • 3.63e3
  • 4.07e3
  • 4.90e3
  • 5.18e3
  • 5.57e3
  • 6.15e3
  • 6.24e3
  • 6.24e3
  • 6.28e3
  • 6.33e3
  • 6.57e3
  • 6.67e3
  • 6.72e3
  • 7.03e3
  • 7.44e3
  • 7.91e3
87.85
  • 87.85
  • 86.36
  • 83.60
  • 82.65
  • 81.36
  • 79.39
  • 79.10
  • 79.10
  • 78.97
  • 78.80
  • 78.00
  • 77.66
  • 77.50
  • 76.46
  • 75.07
  • 73.52
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.38
  • 87.38
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
3.95e3
  • 3.95e3
86.78
  • 86.78
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
4.09e3
  • 4.09e3
86.31
  • 86.31
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
4.51e3
  • 4.51e3
84.92
  • 84.92
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
4.51e3
  • 4.51e3
84.89
  • 84.89
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.63e3
  • 4.63e3
84.50
  • 84.50
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.73e3
  • 4.73e3
84.18
  • 84.18
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
5.12e3
  • 5.12e3
82.85
  • 82.85
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
5.74e3
  • 5.74e3
80.78
  • 80.78
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
5.79e3
  • 5.79e3
80.62
  • 80.62
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
5.95e3
  • 5.95e3
80.07
  • 80.07
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.97e3
  • 5.97e3
80.03
  • 80.03
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.03e3
  • 6.03e3
79.82
  • 79.82
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
6.07e3
  • 6.07e3
79.68
  • 79.68
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
6.14e3
  • 6.14e3
79.44
  • 79.44
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000029Pharyngula:Prim-5
7.27e3
  • 7.27e3
  • 1.19e4
  • 1.20e4
  • 1.20e4
  • 1.25e4
75.67
  • 75.67
  • 60.31
  • 59.98
  • 59.98
  • 58.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
7.47e3
  • 7.47e3
74.99
  • 74.99
AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
8.00e3
  • 8.00e3
73.22
  • 73.22
AEIR
  • AEIR
UBERON:4000164caudal fin
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
8.42e3
  • 8.42e3
  • 9.48e3
71.81
  • 71.81
  • 68.25
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
9.55e3
  • 9.55e3
  • 1.35e4
  • 1.36e4
68.02
  • 68.02
  • 54.73
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001017central nervous system
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
1.03e4
  • 1.03e4
  • 1.07e4
65.37
  • 65.37
  • 64.27
AEIR
  • AEIR
  • AEIR
UBERON:0003060pronephric duct
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
1.08e4
  • 1.08e4
  • 1.14e4
  • 1.20e4
  • 1.20e4
  • 1.21e4
  • 1.26e4
  • 1.31e4
  • 1.31e4
63.87
  • 63.87
  • 61.75
  • 59.98
  • 59.98
  • 59.36
  • 57.87
  • 56.23
  • 56.23
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003069otic placode
  • ZFS:0000026Segmentation:14-19 somites
1.10e4
  • 1.10e4
63.14
  • 63.14
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000027Segmentation:20-25 somites
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000028Segmentation:26+ somites
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
  • 1.18e4
  • 1.20e4
  • 1.25e4
  • 1.27e4
  • 1.28e4
  • 1.29e4
60.84
  • 60.84
  • 60.50
  • 59.98
  • 58.29
  • 57.47
  • 57.12
  • 56.79
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
ZFA:0000003adaxial cell (Danio)
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
1.25e4
  • 1.25e4
  • 1.32e4
  • 1.33e4
58.31
  • 58.31
  • 55.86
  • 55.53
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003082myotome
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
1.33e4
  • 1.33e4
  • 1.34e4
55.53
  • 55.53
  • 55.24
AEIR
  • AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000023Segmentation:1-4 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000025Segmentation:10-13 somites
1.34e4
  • 1.34e4
  • 1.36e4
  • 1.36e4
54.97
  • 54.97
  • 54.52
  • 54.52
AEIR
  • AEIR
  • AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

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