D. rerio Gene: zgc:194209 - ENSDARG00000039356 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039356
Namezgc:194209
Descriptionzgc:194209 [Source:ZFIN;Acc:ZDB-GENE-081022-75]
OrganismDanio rerio (zebrafish)
Orthologs(s)1 orthologs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
5.82e3
  • 5.82e3
80.53
  • 80.53
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
5.85e3
  • 5.85e3
80.42
  • 80.42
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.50e3
  • 6.50e3
  • 1.45e4
78.25
  • 78.25
  • 51.37
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
6.95e3
  • 6.95e3
  • 8.48e3
76.74
  • 76.74
  • 71.60
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.17
  • 71.17
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
8.93e3
  • 8.93e3
  • 1.01e4
  • 1.07e4
  • 1.42e4
  • 1.70e4
70.11
  • 70.11
  • 66.23
  • 64.29
  • 52.62
  • 43.03
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
8.97e3
  • 8.97e3
  • 1.00e4
69.96
  • 69.96
  • 66.51
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.06e4
  • 1.06e4
  • 1.33e4
64.40
  • 64.40
  • 55.42
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.07e4
  • 1.07e4
64.33
  • 64.33
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.30e4
  • 1.30e4
56.32
  • 56.32
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.36e4
  • 1.36e4
54.36
  • 54.36
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.37
  • 53.37
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.69
  • 52.69
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.42e4
  • 1.42e4
52.49
  • 52.49
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.51e4
  • 1.51e4
49.50
  • 49.50
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.52e4
  • 1.52e4
49.18
  • 49.18
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.61
  • 48.61
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
  • 1.85e4
45.03
  • 45.03
  • 38.05
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.81
  • 38.81
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.40
  • 38.40
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.92e4
  • 1.92e4
35.63
  • 35.63
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.02e4
  • 2.02e4
32.52
  • 32.52
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Orthologs
Taxon nameSpecies with orthologsGene(s)Expression comparisonSee details
Euteleostomi1 species1 geneCompare expression

Orthology information comes from OMA : ENSDARG00000039356.

Cross-references

EnsemblENSDARG00000039356 (zgc:194209)
ZFINZDB-GENE-081022-75 (zgc:194209)
EMBLBC163230, FP102892
Uniprot/SPTREMBLB3DIS2, B3DIS2_DANRE

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