D. rerio Gene: calhm2 - ENSDARG00000039482 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039482
Namecalhm2
Descriptioncalcium homeostasis modulator 2 [Source:ZFIN;Acc:ZDB-GENE-030616-561]
OrganismDanio rerio (zebrafish)
Synonym(s)fam26b, fam26b,gn si:xx-packtrz.5, loc51063, si:packtrz.5, si:xx-packtrz.5, wu:fj22g12, zgc:91906

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.19e3
  • 8.19e3
72.58
  • 72.58
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.39e3
  • 8.39e3
71.90
  • 71.90
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.62e3
  • 9.62e3
67.79
  • 67.79
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.94e3
  • 9.94e3
  • 1.16e4
66.71
  • 66.71
  • 61.19
AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
  • 1.22e4
  • 1.49e4
60.70
  • 60.70
  • 59.08
  • 50.25
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.34e4
  • 1.34e4
  • 1.48e4
55.21
  • 55.21
  • 50.36
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.11
  • 50.11
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.91
  • 49.91
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.51e4
  • 1.51e4
49.60
  • 49.60
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.37
  • 46.37
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
1.68e4
  • 1.68e4
  • 1.81e4
  • 1.89e4
  • 1.91e4
  • 2.01e4
43.76
  • 43.76
  • 39.47
  • 36.85
  • 35.91
  • 32.62
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.69e4
  • 1.69e4
43.26
  • 43.26
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
1.75e4
  • 1.75e4
  • 1.80e4
41.52
  • 41.52
  • 39.85
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.72
  • 40.72
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.68
  • 39.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • EST data: Bgee
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • EST data: UniGene
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLBC078392, BC164090, BX530079
EnsemblENSDARG00000039482 (calhm2)
Uniprot/SPTREMBLQ6DBR8, Q6DBR8_DANRE
ZFINZDB-GENE-030616-561 (calhm2)

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