D. rerio Gene: git1 - ENSDARG00000039489 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039489
Namegit1
DescriptionG protein-coupled receptor kinase interacting ArfGAP 1 [Source:ZFIN;Acc:ZDB-GENE-100408-5]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000468multi-cellular organism
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000034Hatching:Pec-fin
  • ZFS:0000033Hatching:Long-pec
1.54e3
  • 1.54e3
  • 1.66e3
  • 5.97e3
  • 6.22e3
  • 6.79e3
  • 6.79e3
  • 7.47e3
94.85
  • 94.85
  • 94.45
  • 80.00
  • 79.16
  • 77.27
  • 77.27
  • 74.99
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
4.25e3
  • 4.25e3
85.79
  • 85.79
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
4.47e3
  • 4.47e3
  • 5.75e3
85.03
  • 85.03
  • 80.76
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
4.77e3
  • 4.77e3
84.03
  • 84.03
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
5.46e3
  • 5.46e3
81.70
  • 81.70
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
6.34e3
  • 6.34e3
78.79
  • 78.79
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.51e3
  • 6.51e3
78.22
  • 78.22
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.63e3
  • 7.63e3
74.44
  • 74.44
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
7.74e3
  • 7.74e3
  • 7.80e3
  • 8.52e3
  • 8.70e3
  • 9.90e3
74.09
  • 74.09
  • 73.89
  • 71.49
  • 70.86
  • 66.85
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
7.85e3
  • 7.85e3
  • 9.86e3
73.70
  • 73.70
  • 66.99
AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.93e3
  • 7.93e3
  • 7.97e3
73.44
  • 73.44
  • 73.32
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000032Pharyngula:High-pec
  • ZFS:0000034Hatching:Pec-fin
8.56e3
  • 8.56e3
  • 1.09e4
  • 1.12e4
  • 1.12e4
  • 1.12e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
  • 1.49e4
71.35
  • 71.35
  • 63.35
  • 62.50
  • 62.50
  • 62.50
  • 50.00
  • 50.00
  • 50.00
  • 50.00
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
8.61e3
  • 8.61e3
71.19
  • 71.19
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.60
  • 70.60
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.81e3
  • 8.81e3
70.50
  • 70.50
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
8.90e3
  • 8.90e3
  • 1.12e4
70.21
  • 70.21
  • 62.65
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
9.08e3
  • 9.08e3
69.61
  • 69.61
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.46e3
  • 9.46e3
68.32
  • 68.32
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.90
  • 66.90
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.93e3
  • 9.93e3
66.75
  • 66.75
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.96
  • 65.96
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
65.01
  • 65.01
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.94
  • 64.94
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.06e4
  • 1.06e4
64.58
  • 64.58
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.14e4
  • 1.14e4
61.86
  • 61.86
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.24e4
  • 1.24e4
58.63
  • 58.63
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCU570681
EnsemblENSDARG00000039489 (git1)
Uniprot/SPTREMBLE7FAZ2, E7FAZ2_DANRE
ZFINZDB-GENE-100408-5 (git1)

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