D. rerio Gene: LRFN3 (1 to many) - ENSDARG00000039500 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039500
NameLRFN3 (1 to many)
Descriptionleucine rich repeat and fibronectin type III domain containing 3 [Source:HGNC Symbol;Acc:HGNC:28370]
OrganismDanio rerio (zebrafish)
Synonym(s)figler1, mgc2656, salm4

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
8.30e3
  • 8.30e3
72.23
  • 72.23
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.71
  • 64.71
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
1.53e4
  • 1.53e4
  • 1.91e4
  • 2.09e4
48.89
  • 48.89
  • 36.19
  • 30.01
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.68e4
  • 1.68e4
  • 2.05e4
43.87
  • 43.87
  • 31.50
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
1.72e4
  • 1.72e4
42.52
  • 42.52
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.89e4
  • 1.89e4
36.68
  • 36.68
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.29e4
  • 2.29e4
23.44
  • 23.44
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EnsemblENSDARG00000039500 (LRFN3 (1 to many))
HGNCHGNC:28370 (LRFN3 (1 to many))
Uniprot/SPTREMBLE7FB24, E7FB24_DANRE

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