D. rerio Gene: ap1m3 - ENSDARG00000039512 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039512
Nameap1m3
Descriptionadaptor-related protein complex 1, mu 3 subunit [Source:ZFIN;Acc:ZDB-GENE-040801-159]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:100915
Paralog(s)6 paralogs

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.38e3
  • 7.38e3
75.29
  • 75.29
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
74.77
  • 74.77
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
7.61e3
  • 7.61e3
74.53
  • 74.53
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
8.06e3
  • 8.06e3
73.00
  • 73.00
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
8.47e3
  • 8.47e3
  • 8.83e3
71.64
  • 71.64
  • 70.43
AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.00e3
  • 9.00e3
  • 9.13e3
69.88
  • 69.88
  • 69.42
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.31
  • 65.31
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000037Larval:Day 5
1.09e4
  • 1.09e4
  • 1.11e4
  • 1.22e4
  • 1.41e4
  • 1.66e4
63.53
  • 63.53
  • 62.76
  • 59.20
  • 52.94
  • 44.30
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.30
  • 62.30
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.02
  • 61.02
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.66
  • 60.66
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.21e4
  • 1.21e4
59.65
  • 59.65
AEIR
  • AEIR
UBERON:0002037cerebellum
  • ZFS:0000029Pharyngula:Prim-5
1.25e4
  • 1.25e4
58.31
  • 58.31
AEIR
  • AEIR
UBERON:0003052midbrain-hindbrain boundary
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.28e4
  • 1.28e4
  • 1.49e4
57.12
  • 57.12
  • 49.98
AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000033Hatching:Long-pec
1.31e4
  • 1.31e4
56.24
  • 56.24
AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.01
  • 54.01
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.43e4
  • 1.43e4
  • 1.57e4
52.25
  • 52.25
  • 47.34
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.86
  • 48.86
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.71
  • 47.71
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.67e4
  • 1.67e4
43.98
  • 43.98
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.68e4
  • 1.68e4
43.72
  • 43.72
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.82
  • 40.82
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.80e4
  • 1.80e4
39.63
  • 39.63
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.34
  • 37.34
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
1.92e4
  • 1.92e4
35.67
  • 35.67
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores
 important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Paralogs (same species)
Taxon nameGene(s)Expression comparisonSee details
Opisthokonta2 genesCompare expression
Eukaryota6 genesCompare expression

Paralogy information comes from OMA : ENSDARG00000039512.

Cross-references

EnsemblENSDARG00000039512 (ap1m3)
ZFINZDB-GENE-040801-159 (ap1m3)
EMBLCABZ01069518, CABZ01069519
Uniprot/SPTREMBLF1Q997, F1Q997_DANRE

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