D. rerio Gene: mrps6 - ENSDARG00000039543 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039543
Namemrps6
Descriptionmitochondrial ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-060825-59]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:153390

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000017Gastrula:50%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000020Gastrula:75%-epiboly
  • UBERON:0000109gastrula stage
1.07e3
  • 1.07e3
  • 1.40e3
  • 1.89e3
  • 1.91e3
  • 2.70e3
  • 3.89e3
96.43
  • 96.43
  • 95.30
  • 93.67
  • 93.62
  • 90.96
  • 86.97
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002329somite
  • ZFS:0000025Segmentation:10-13 somites
1.50e3
  • 1.50e3
94.99
  • 94.99
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
1.92e3
  • 1.92e3
  • 2.22e3
  • 2.91e3
  • 3.75e3
  • 3.77e3
  • 3.84e3
  • 4.43e3
  • 5.27e3
  • 5.69e3
  • 5.79e3
93.57
  • 93.57
  • 92.56
  • 90.27
  • 87.46
  • 87.37
  • 87.14
  • 85.17
  • 82.36
  • 80.94
  • 80.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
2.08e3
  • 2.08e3
93.02
  • 93.02
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
2.25e3
  • 2.25e3
92.47
  • 92.47
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
2.29e3
  • 2.29e3
  • 4.92e3
92.33
  • 92.33
  • 83.53
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.50e3
  • 2.50e3
91.65
  • 91.65
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000026Segmentation:14-19 somites
  • UBERON:0000106zygote stage
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000036Larval:Day 4
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
2.56e3
  • 2.56e3
  • 2.61e3
  • 2.74e3
  • 3.80e3
  • 3.88e3
  • 4.58e3
  • 5.54e3
  • 6.10e3
  • 6.16e3
  • 6.58e3
  • 6.92e3
  • 7.43e3
  • 7.92e3
  • 9.68e3
91.42
  • 91.42
  • 91.26
  • 90.82
  • 87.29
  • 87.01
  • 84.66
  • 81.45
  • 79.59
  • 79.38
  • 77.98
  • 76.84
  • 75.12
  • 73.49
  • 67.59
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0003077paraxial mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.57e3
  • 2.57e3
91.38
  • 91.38
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
2.68e3
  • 2.68e3
91.03
  • 91.03
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
3.14e3
  • 3.14e3
89.49
  • 89.49
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
3.21e3
  • 3.21e3
  • 1.03e4
89.24
  • 89.24
  • 65.51
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
3.30e3
  • 3.30e3
88.97
  • 88.97
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
3.41e3
  • 3.41e3
  • 5.80e3
  • 7.18e3
88.58
  • 88.58
  • 80.57
  • 75.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.43e3
  • 3.43e3
88.53
  • 88.53
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000014Blastula:Sphere
3.47e3
  • 3.47e3
  • 5.74e3
  • 5.74e3
  • 6.80e3
  • 7.48e3
88.39
  • 88.39
  • 80.80
  • 80.78
  • 77.23
  • 74.95
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
3.50e3
  • 3.50e3
88.27
  • 88.27
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
3.77e3
  • 3.77e3
87.40
  • 87.40
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
3.79e3
  • 3.79e3
87.30
  • 87.30
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
3.92e3
  • 3.92e3
86.89
  • 86.89
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
4.17e3
  • 4.17e3
  • 5.20e3
86.05
  • 86.05
  • 82.58
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
4.52e3
  • 4.52e3
84.87
  • 84.87
AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
4.59e3
  • 4.59e3
84.63
  • 84.63
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.60e3
  • 4.60e3
84.59
  • 84.59
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
4.82e3
  • 4.82e3
  • 5.32e3
  • 6.42e3
83.88
  • 83.88
  • 82.19
  • 78.50
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
5.39e3
  • 5.39e3
81.96
  • 81.96
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
5.53e3
  • 5.53e3
  • 7.30e3
81.49
  • 81.49
  • 75.56
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.64
  • 78.64
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.56e3
  • 6.56e3
78.03
  • 78.03
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
6.77e3
  • 6.77e3
77.34
  • 77.34
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.79e3
  • 6.79e3
77.25
  • 77.25
AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
7.27e3
  • 7.27e3
75.67
  • 75.67
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.27e3
  • 8.27e3
72.32
  • 72.32
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.63e3
  • 8.63e3
71.09
  • 71.09
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.43
  • 41.43
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCR854925
EnsemblENSDARG00000039543 (mrps6)
Uniprot/SPTREMBLB8JIY3, B8JIY3_DANRE
ZFINZDB-GENE-060825-59 (mrps6)

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