D. rerio Gene: mtif3 - ENSDARG00000039649 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039649
Namemtif3
Descriptionmitochondrial translational initiation factor 3 [Source:ZFIN;Acc:ZDB-GENE-060228-1]
OrganismDanio rerio (zebrafish)
Synonym(s)fd12b09, si:ch211-271b14.5, wu:fd12b09

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.37e3
  • 1.37e3
95.40
  • 95.40
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
4.11e3
  • 4.11e3
86.24
  • 86.24
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000037Larval:Day 5
  • ZFS:0000030Pharyngula:Prim-15
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000031Pharyngula:Prim-25
4.43e3
  • 4.43e3
  • 6.45e3
  • 7.78e3
  • 9.79e3
  • 9.87e3
  • 9.97e3
  • 1.06e4
  • 1.07e4
  • 1.10e4
  • 1.38e4
85.16
  • 85.16
  • 78.40
  • 73.95
  • 67.22
  • 66.97
  • 66.62
  • 64.52
  • 64.16
  • 63.05
  • 53.87
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000017Gastrula:50%-epiboly
  • UBERON:0000109gastrula stage
  • ZFS:0000021Gastrula:90%-epiboly
5.63e3
  • 5.63e3
  • 5.70e3
  • 1.03e4
  • 1.18e4
  • 1.22e4
  • 1.22e4
81.15
  • 81.15
  • 80.93
  • 65.56
  • 60.48
  • 59.10
  • 59.09
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
5.73e3
  • 5.73e3
80.82
  • 80.82
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
5.97e3
  • 5.97e3
  • 8.37e3
80.01
  • 80.01
  • 71.97
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
6.22e3
  • 6.22e3
  • 1.28e4
79.17
  • 79.17
  • 57.28
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
6.38e3
  • 6.38e3
78.63
  • 78.63
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000033Hatching:Long-pec
6.55e3
  • 6.55e3
  • 1.14e4
  • 1.14e4
78.08
  • 78.08
  • 61.83
  • 61.66
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
6.79e3
  • 6.79e3
  • 9.66e3
  • 1.30e4
77.28
  • 77.28
  • 67.66
  • 56.63
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.34e3
  • 7.34e3
75.43
  • 75.43
AEIR
  • AEIR
UBERON:0000992female gonad
  • UBERON:0000066fully formed stage
7.54e3
  • 7.54e3
74.77
  • 74.77
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.83e3
  • 7.83e3
73.80
  • 73.80
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
7.91e3
  • 7.91e3
73.51
  • 73.51
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000011Blastula:1k-cell
8.10e3
  • 8.10e3
  • 1.25e4
  • 1.31e4
72.87
  • 72.87
  • 58.23
  • 56.14
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
8.15e3
  • 8.15e3
72.72
  • 72.72
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.44e3
  • 8.44e3
71.74
  • 71.74
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.53e3
  • 8.53e3
71.45
  • 71.45
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000020Gastrula:75%-epiboly
  • ZFS:0000024Segmentation:5-9 somites
  • ZFS:0000021Gastrula:90%-epiboly
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000030Pharyngula:Prim-15
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000026Segmentation:14-19 somites
  • ZFS:0000042Juvenile:Days 30-44
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000036Larval:Day 4
  • ZFS:0000037Larval:Day 5
9.21e3
  • 9.21e3
  • 9.49e3
  • 9.66e3
  • 9.93e3
  • 1.02e4
  • 1.03e4
  • 1.10e4
  • 1.10e4
  • 1.11e4
  • 1.19e4
  • 1.27e4
  • 1.27e4
  • 1.27e4
69.15
  • 69.15
  • 68.21
  • 67.66
  • 66.75
  • 65.79
  • 65.66
  • 63.32
  • 63.02
  • 62.96
  • 60.31
  • 57.53
  • 57.42
  • 57.40
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.27e3
  • 9.27e3
68.97
  • 68.97
AEIR
  • AEIR
UBERON:0000955brain
  • ZFS:0000031Pharyngula:Prim-25
  • UBERON:0000066fully formed stage
9.35e3
  • 9.35e3
  • 9.56e3
68.69
  • 68.69
  • 67.98
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.69e3
  • 9.69e3
67.55
  • 67.55
AEIR
  • AEIR
UBERON:0002082cardiac ventricle
  • UBERON:0000066fully formed stage
9.72e3
  • 9.72e3
67.44
  • 67.44
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
9.78e3
  • 9.78e3
67.27
  • 67.27
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.02e4
  • 1.02e4
65.72
  • 65.72
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.04e4
  • 1.04e4
65.12
  • 65.12
AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.07e4
  • 1.07e4
64.17
  • 64.17
AEIR
  • AEIR
UBERON:4000164caudal fin
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000066fully formed stage
1.18e4
  • 1.18e4
  • 1.18e4
60.63
  • 60.63
  • 60.34
AEIR
  • AEIR
  • AEIR
UBERON:0009620tail bud paraxial mesoderm
  • ZFS:0000027Segmentation:20-25 somites
1.34e4
  • 1.34e4
55.02
  • 55.02
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.44e4
  • 1.44e4
51.79
  • 51.79
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX247876
EnsemblENSDARG00000039649 (mtif3)
Uniprot/SPTREMBLA2BEV1, A2BEV1_DANRE, F1QA65, F1QA65_DANRE
ZFINZDB-GENE-060228-1 (mtif3)

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