D. rerio Gene: zgc:112160 - ENSDARG00000039730 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039730
Namezgc:112160
Descriptionzgc:112160 [Source:ZFIN;Acc:ZDB-GENE-050417-229]
OrganismDanio rerio (zebrafish)

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
42.0
  • 42.0
99.86
  • 99.86
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
166
  • 166
99.45
  • 99.45
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
191
  • 191
  • 2.88e4
99.37
  • 99.37
  • 3.49
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
308
  • 308
98.97
  • 98.97
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
461
  • 461
98.46
  • 98.46
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • UBERON:0000104life cycle
1.93e3
  • 1.93e3
  • 4.10e3
  • 1.07e4
  • 1.44e4
93.55
  • 93.55
  • 86.27
  • 64.21
  • 51.88
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.30e3
  • 2.30e3
92.31
  • 92.31
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.19e3
  • 3.19e3
  • 1.64e4
89.33
  • 89.33
  • 45.03
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
3.58e3
  • 3.58e3
88.01
  • 88.01
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
6.35e3
  • 6.35e3
78.74
  • 78.74
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.29e3
  • 7.29e3
75.60
  • 75.60
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
9.99e3
  • 9.99e3
  • 2.02e4
66.56
  • 66.56
  • 32.33
AEIR
  • AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.17e4
  • 1.17e4
60.96
  • 60.96
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.84e4
  • 1.84e4
38.27
  • 38.27
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.91e4
  • 1.91e4
36.01
  • 36.01
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.96e4
  • 1.96e4
34.44
  • 34.44
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.08e4
  • 2.08e4
30.34
  • 30.34
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.48e4
  • 2.48e4
17.09
  • 17.09
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
Sources of raw data:

Cross-references

EMBLBC093233, CR356247
EnsemblENSDARG00000039730 (zgc:112160)
Uniprot/SPTREMBLQ561U4, Q561U4_DANRE
ZFINZDB-GENE-050417-229 (zgc:112160)

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