D. rerio Gene: si:ch73-308m11.1 - ENSDARG00000039752 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039752
Namesi:ch73-308m11.1
Descriptionsi:ch73-308m11.1 [Source:ZFIN;Acc:ZDB-GENE-091204-76]
OrganismDanio rerio (zebrafish)
Synonym(s)loc100149441

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002107liver
  • UBERON:0000066fully formed stage
4.37e3
  • 4.37e3
85.38
  • 85.38
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
8.45e3
  • 8.45e3
71.71
  • 71.71
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
9.44e3
  • 9.44e3
68.40
  • 68.40
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
9.67e3
  • 9.67e3
67.62
  • 67.62
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.15e4
  • 1.15e4
  • 1.67e4
61.61
  • 61.61
  • 44.18
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.24e4
  • 1.24e4
58.51
  • 58.51
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.89
  • 52.89
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.46e4
  • 1.46e4
51.05
  • 51.05
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.60e4
  • 1.60e4
46.43
  • 46.43
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.61e4
  • 1.61e4
46.06
  • 46.06
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
1.67e4
  • 1.67e4
  • 1.67e4
  • 1.76e4
  • 1.99e4
  • 2.07e4
44.20
  • 44.20
  • 44.13
  • 41.16
  • 33.28
  • 30.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.76e4
  • 1.76e4
  • 1.92e4
41.13
  • 41.13
  • 35.55
AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
26.14
  • 26.14
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.21e4
  • 2.21e4
25.84
  • 25.84
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLBC125964, CR792453, CU394254
EnsemblENSDARG00000039752 (si:ch73-308m11.1)
Uniprot/SPTREMBLA0JMQ2, A0JMQ2_DANRE
ZFINZDB-GENE-091204-76 (si:ch73-308m11.1)

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