D. rerio Gene: lifrb - ENSDARG00000039863 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039863
Namelifrb
Descriptionleukemia inhibitory factor receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-080107-2]
OrganismDanio rerio (zebrafish)
Synonym(s)lifr.b

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
6.55e3
  • 6.55e3
78.06
  • 78.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
6.73e3
  • 6.73e3
77.48
  • 77.48
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
7.00e3
  • 7.00e3
76.56
  • 76.56
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
7.97e3
  • 7.97e3
73.33
  • 73.33
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.42
  • 72.42
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
8.86e3
  • 8.86e3
70.33
  • 70.33
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
8.89e3
  • 8.89e3
70.24
  • 70.24
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
9.73e3
  • 9.73e3
67.41
  • 67.41
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.20
  • 66.20
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
1.05e4
  • 1.05e4
64.82
  • 64.82
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.19e4
  • 1.19e4
60.04
  • 60.04
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.14
  • 58.14
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000033Hatching:Long-pec
1.29e4
  • 1.29e4
56.79
  • 56.79
AEIR
  • AEIR
UBERON:0001890forebrain
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000035Larval:Protruding-mouth
  • ZFS:0000029Pharyngula:Prim-5
1.29e4
  • 1.29e4
  • 1.49e4
  • 1.49e4
56.65
  • 56.65
  • 49.99
  • 49.97
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0001891midbrain
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0002328notochord
  • ZFS:0000029Pharyngula:Prim-5
1.34e4
  • 1.34e4
54.97
  • 54.97
AEIR
  • AEIR
UBERON:0003051ear vesicle
  • ZFS:0000029Pharyngula:Prim-5
1.35e4
  • 1.35e4
54.96
  • 54.96
AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
  • 1.38e4
54.04
  • 54.04
  • 53.65
AEIR
  • AEIR
  • AEIR
UBERON:0001714cranial ganglion
  • ZFS:0000033Hatching:Long-pec
1.39e4
  • 1.39e4
53.55
  • 53.55
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.41e4
  • 1.41e4
52.77
  • 52.77
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.26
  • 52.26
AEIR
  • AEIR
UBERON:0001782pigmented layer of retina
  • ZFS:0000033Hatching:Long-pec
1.49e4
  • 1.49e4
49.99
  • 49.99
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.68e4
  • 1.68e4
  • 1.80e4
43.63
  • 43.63
  • 39.79
AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
1.77e4
  • 1.77e4
  • 1.78e4
  • 1.82e4
  • 2.03e4
  • 2.04e4
40.84
  • 40.84
  • 40.26
  • 38.89
  • 32.17
  • 31.61
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.01e4
  • 2.01e4
32.68
  • 32.68
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: Bgee
Sources of raw data:
  • In situ hybridization data: ZFIN
  • RNA-Seq data: GEO

Cross-references

EMBLCT827810
EnsemblENSDARG00000039863 (lifrb)
Uniprot/SPTREMBLF1Q5F5, F1Q5F5_DANRE, F1QRJ3, F1QRJ3_DANRE
ZFINZDB-GENE-080107-2 (lifrb)

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