D. rerio Gene: rpz4 - ENSDARG00000039871 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039871
Namerpz4
Descriptionrapunzel 4 [Source:ZFIN;Acc:ZDB-GENE-050417-472]
OrganismDanio rerio (zebrafish)
Synonym(s)zgc:113320

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
4.11e3
  • 4.11e3
86.24
  • 86.24
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
4.58e3
  • 4.58e3
84.67
  • 84.67
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.74e3
  • 5.74e3
80.78
  • 80.78
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
5.98e3
  • 5.98e3
  • 7.28e3
  • 7.55e3
  • 9.46e3
  • 1.44e4
79.99
  • 79.99
  • 75.62
  • 74.72
  • 68.33
  • 51.73
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
6.24e3
  • 6.24e3
  • 1.90e4
79.11
  • 79.11
  • 36.36
AEIR
  • AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
6.26e3
  • 6.26e3
79.03
  • 79.03
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
6.36e3
  • 6.36e3
78.71
  • 78.71
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
7.15e3
  • 7.15e3
  • 7.48e3
76.05
  • 76.05
  • 74.97
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
7.24e3
  • 7.24e3
75.75
  • 75.75
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
8.78e3
  • 8.78e3
70.59
  • 70.59
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
9.40e3
  • 9.40e3
68.52
  • 68.52
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000019Gastrula:Shield
9.76e3
  • 9.76e3
  • 1.19e4
67.33
  • 67.33
  • 60.04
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
9.89e3
  • 9.89e3
66.88
  • 66.88
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.00e4
  • 1.00e4
66.48
  • 66.48
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.09e4
  • 1.09e4
63.58
  • 63.58
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.13e4
  • 1.13e4
62.14
  • 62.14
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.16e4
  • 1.16e4
61.19
  • 61.19
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.16e4
  • 1.16e4
  • 1.26e4
61.02
  • 61.02
  • 57.72
AEIR
  • AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.20e4
  • 1.20e4
59.77
  • 59.77
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000015Blastula:Dome
1.22e4
  • 1.22e4
  • 1.65e4
59.31
  • 59.31
  • 44.85
AEIR
  • AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.37e4
  • 1.37e4
54.09
  • 54.09
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.49e4
  • 1.49e4
49.97
  • 49.97
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.51e4
  • 1.51e4
49.52
  • 49.52
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.55e4
  • 1.55e4
48.05
  • 48.05
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.74e4
  • 1.74e4
41.76
  • 41.76
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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