D. rerio Gene: SIM2 - ENSDARG00000039935 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039935
NameSIM2
Descriptionsingle-minded family bHLH transcription factor 2 [Source:HGNC Symbol;Acc:HGNC:10883]
OrganismDanio rerio (zebrafish)
Synonym(s)bhlhe15, mgc119447, sim

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.37e4
  • 1.37e4
54.03
  • 54.03
AEIR
  • AEIR
UBERON:0002548larva
  • UBERON:0000069larval stage
  • ZFS:0000037Larval:Day 5
1.48e4
  • 1.48e4
  • 1.85e4
50.28
  • 50.28
  • 38.01
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
1.51e4
  • 1.51e4
49.41
  • 49.41
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.54e4
  • 1.54e4
48.55
  • 48.55
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
  • ZFS:0000037Larval:Day 5
1.59e4
  • 1.59e4
  • 1.67e4
  • 1.73e4
  • 1.79e4
  • 2.07e4
46.72
  • 46.72
  • 44.18
  • 42.06
  • 39.92
  • 30.63
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
  • 1.86e4
42.51
  • 42.51
  • 37.61
AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.65
  • 40.65
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.83e4
  • 1.83e4
38.85
  • 38.85
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.69
  • 34.69
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.16
  • 34.16
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.26
  • 31.26
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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