D. rerio Gene: GFRA1 (1 to many) - ENSDARG00000039936 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039936
NameGFRA1 (1 to many)
DescriptionGDNF family receptor alpha 1 [Source:HGNC Symbol;Acc:HGNC:4243]
OrganismDanio rerio (zebrafish)
Synonym(s)gdnfr, gdnfra, gfr-alpha-1, ret1l, retl1, trnr1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.70e3
  • 1.70e3
94.33
  • 94.33
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
8.59e3
  • 8.59e3
  • 1.76e4
71.24
  • 71.24
  • 41.07
AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
9.19e3
  • 9.19e3
  • 1.54e4
  • 1.54e4
69.23
  • 69.23
  • 48.52
  • 48.35
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000025Segmentation:10-13 somites
  • ZFS:0000029Pharyngula:Prim-5
9.23e3
  • 9.23e3
  • 1.42e4
  • 1.48e4
  • 1.48e4
  • 1.54e4
  • 1.61e4
69.08
  • 69.08
  • 52.35
  • 50.41
  • 50.32
  • 48.27
  • 45.92
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000022Gastrula:Bud
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.29e4
  • 1.29e4
  • 1.75e4
  • 2.09e4
56.85
  • 56.85
  • 41.42
  • 30.03
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.32e4
  • 1.32e4
55.86
  • 55.86
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.33e4
  • 1.33e4
55.50
  • 55.50
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.49e4
  • 1.49e4
50.26
  • 50.26
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.64e4
  • 1.64e4
44.98
  • 44.98
AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.71e4
  • 1.71e4
42.87
  • 42.87
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.74e4
  • 1.74e4
41.81
  • 41.81
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
1.75e4
  • 1.75e4
41.33
  • 41.33
AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000036Larval:Day 4
  • ZFS:0000022Gastrula:Bud
  • ZFS:0000037Larval:Day 5
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000033Hatching:Long-pec
1.76e4
  • 1.76e4
  • 1.78e4
  • 1.78e4
  • 1.78e4
  • 1.79e4
  • 1.81e4
40.98
  • 40.98
  • 40.56
  • 40.54
  • 40.38
  • 40.18
  • 39.42
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.97e4
  • 1.97e4
34.00
  • 34.00
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
2.19e4
  • 2.19e4
  • 2.33e4
26.72
  • 26.72
  • 22.05
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.24e4
  • 2.24e4
25.15
  • 25.15
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLCABZ01075204
EnsemblENSDARG00000039936 (GFRA1 (1 to many))
HGNCHGNC:4243 (GFRA1 (1 to many))
Uniprot/SPTREMBLF1R987, F1R987_DANRE

Do not show this banner again