D. rerio Gene: ccdc172 - ENSDARG00000039937 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000039937
Nameccdc172
Descriptioncoiled-coil domain containing 172 [Source:ZFIN;Acc:ZDB-GENE-090313-1]
OrganismDanio rerio (zebrafish)
Synonym(s)si:ch1073-126c3.3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.70e3
  • 1.70e3
94.31
  • 94.31
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.70e3
  • 8.70e3
70.87
  • 70.87
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
9.44e3
  • 9.44e3
  • 9.82e3
68.41
  • 68.41
  • 67.12
AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
9.80e3
  • 9.80e3
67.19
  • 67.19
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.01e4
  • 1.01e4
66.12
  • 66.12
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
1.06e4
  • 1.06e4
  • 1.34e4
64.46
  • 64.46
  • 55.21
AEIR
  • AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.08e4
  • 1.08e4
63.85
  • 63.85
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
1.25e4
  • 1.25e4
58.15
  • 58.15
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
1.39e4
  • 1.39e4
53.58
  • 53.58
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
  • UBERON:0000068embryo stage
1.48e4
  • 1.48e4
  • 2.15e4
  • 2.32e4
50.41
  • 50.41
  • 27.88
  • 22.26
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.56e4
  • 1.56e4
47.83
  • 47.83
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.64e4
  • 1.64e4
45.10
  • 45.10
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.66e4
  • 1.66e4
44.30
  • 44.30
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.72e4
  • 1.72e4
42.51
  • 42.51
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
2.30e4
  • 2.30e4
22.88
  • 22.88
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU633804
EnsemblENSDARG00000039937 (ccdc172)
Uniprot/SPTREMBLB8JME7, B8JME7_DANRE
ZFINZDB-GENE-090313-1 (ccdc172)

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