D. rerio Gene: palld - ENSDARG00000040009 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040009
Namepalld
Descriptionpalladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
OrganismDanio rerio (zebrafish)
Synonym(s)si:dkey-90m5.1

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000948heart
  • ZFS:0000036Larval:Day 4
  • UBERON:0000066fully formed stage
744
  • 744
  • 905
97.51
  • 97.51
  • 96.97
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.03e3
  • 1.03e3
96.56
  • 96.56
AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
1.36e3
  • 1.36e3
95.46
  • 95.46
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
1.39e3
  • 1.39e3
95.36
  • 95.36
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.51e3
  • 1.51e3
94.96
  • 94.96
AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
1.65e3
  • 1.65e3
94.49
  • 94.49
AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.93e3
  • 1.93e3
93.54
  • 93.54
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
2.07e3
  • 2.07e3
93.06
  • 93.06
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
2.16e3
  • 2.16e3
92.78
  • 92.78
AEIR
  • AEIR
UBERON:0000922embryo
  • UBERON:0000068embryo stage
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
  • ZFS:0000029Pharyngula:Prim-5
2.46e3
  • 2.46e3
  • 3.05e3
  • 3.18e3
  • 4.10e3
  • 4.15e3
91.77
  • 91.77
  • 89.79
  • 89.35
  • 86.29
  • 86.12
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
3.23e3
  • 3.23e3
  • 4.34e3
89.18
  • 89.18
  • 85.48
AEIR
  • AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
3.24e3
  • 3.24e3
89.15
  • 89.15
AEIR
  • AEIR
UBERON:0000033head
  • UBERON:0000066fully formed stage
  • ZFS:0000037Larval:Day 5
3.93e3
  • 3.93e3
  • 1.37e4
86.84
  • 86.84
  • 54.18
AEIR
  • AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
4.13e3
  • 4.13e3
86.16
  • 86.16
AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
4.61e3
  • 4.61e3
  • 4.97e3
84.58
  • 84.58
  • 83.36
AEIR
  • AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
5.05e3
  • 5.05e3
83.08
  • 83.08
AEIR
  • AEIR
UBERON:0000160intestine
  • UBERON:0000066fully formed stage
5.74e3
  • 5.74e3
80.77
  • 80.77
AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
6.62e3
  • 6.62e3
  • 1.03e4
77.85
  • 77.85
  • 65.51
AEIR
  • AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
7.59e3
  • 7.59e3
74.60
  • 74.60
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
8.02e3
  • 8.02e3
73.16
  • 73.16
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
8.24e3
  • 8.24e3
72.43
  • 72.43
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
8.96e3
  • 8.96e3
70.01
  • 70.01
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.11e4
  • 1.11e4
62.70
  • 62.70
AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.23e4
  • 1.23e4
58.65
  • 58.65
AEIR
  • AEIR
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
1.37e4
  • 1.37e4
54.13
  • 54.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

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