D. rerio Gene: GALNTL6 - ENSDARG00000040048 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040048
NameGALNTL6
Descriptionsi:ch211-15e22.3 [Source:ZFIN;Acc:ZDB-GENE-090312-115]
OrganismDanio rerio (zebrafish)
Synonym(s)galnac-t6l, galnt17

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000966retina
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
  • ZFS:0000033Hatching:Long-pec
3.71e3
  • 3.71e3
  • 1.27e4
  • 1.35e4
87.58
  • 87.58
  • 57.56
  • 54.93
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
  • ZFS:0000031Pharyngula:Prim-25
6.10e3
  • 6.10e3
  • 1.55e4
79.59
  • 79.59
  • 48.26
AEIR
  • AEIR
  • AEIR
UBERON:0003982mature ovarian follicle
  • UBERON:0000066fully formed stage
8.46e3
  • 8.46e3
71.68
  • 71.68
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000037Larval:Day 5
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000031Pharyngula:Prim-25
  • ZFS:0000025Segmentation:10-13 somites
  • UBERON:0000068embryo stage
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0004707pharyngula stage
8.73e3
  • 8.73e3
  • 1.26e4
  • 1.43e4
  • 1.78e4
  • 1.83e4
  • 1.88e4
  • 1.92e4
70.76
  • 70.76
  • 57.71
  • 52.09
  • 40.40
  • 38.58
  • 36.92
  • 35.68
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000307blastula
  • ZFS:0000011Blastula:1k-cell
  • ZFS:0000009Blastula:256-cell
  • ZFS:0000016Blastula:30%-epiboly
  • ZFS:0000015Blastula:Dome
9.99e3
  • 9.99e3
  • 1.29e4
  • 1.36e4
  • 1.45e4
66.57
  • 66.57
  • 56.71
  • 54.32
  • 51.38
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.05e4
  • 1.05e4
64.70
  • 64.70
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
  • ZFS:0000035Larval:Protruding-mouth
1.08e4
  • 1.08e4
  • 1.37e4
  • 1.40e4
63.70
  • 63.70
  • 53.96
  • 53.11
AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0000468multi-cellular organism
  • ZFS:0000037Larval:Day 5
  • ZFS:0000036Larval:Day 4
  • ZFS:0000033Hatching:Long-pec
  • UBERON:0000106zygote stage
  • ZFS:0000040Larval:Days 14-20
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000029Pharyngula:Prim-5
  • ZFS:0000042Juvenile:Days 30-44
1.12e4
  • 1.12e4
  • 1.55e4
  • 1.58e4
  • 1.58e4
  • 1.66e4
  • 1.78e4
  • 1.79e4
  • 1.84e4
62.38
  • 62.38
  • 48.19
  • 47.25
  • 47.04
  • 44.54
  • 40.38
  • 40.18
  • 38.44
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0007010cleaving embryo
  • ZFS:0000005Cleavage:16-cell
1.14e4
  • 1.14e4
61.98
  • 61.98
AEIR
  • AEIR
UBERON:0004734gastrula
  • UBERON:0000109gastrula stage
  • ZFS:0000019Gastrula:Shield
1.44e4
  • 1.44e4
  • 1.66e4
51.90
  • 51.90
  • 44.35
AEIR
  • AEIR
  • AEIR
UBERON:0003059presomitic mesoderm
  • ZFS:0000025Segmentation:10-13 somites
1.53e4
  • 1.53e4
48.64
  • 48.64
AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.54e4
  • 1.54e4
48.41
  • 48.41
AEIR
  • AEIR
UBERON:0002199integument
  • UBERON:0000066fully formed stage
1.77e4
  • 1.77e4
40.77
  • 40.77
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.49
  • 37.49
AEIR
  • AEIR
UBERON:0002481bone tissue
  • UBERON:0000066fully formed stage
1.94e4
  • 1.94e4
35.06
  • 35.06
AEIR
  • AEIR
UBERON:0002113kidney
  • UBERON:0000066fully formed stage
1.95e4
  • 1.95e4
34.69
  • 34.69
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
2.19e4
  • 2.19e4
26.66
  • 26.66
AEIR
  • AEIR
UBERON:0002107liver
  • UBERON:0000066fully formed stage
2.25e4
  • 2.25e4
24.54
  • 24.54
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • Affymetrix data: Bgee
  • RNA-Seq data: Bgee
Sources of raw data:

Cross-references

EMBLBX927375, CR391923, CT583668, CU462871
EnsemblENSDARG00000040048 (GALNTL6)
HGNCHGNC:33844 (GALNTL6)
Uniprot/SPTREMBLB8A6C4, B8A6C4_DANRE
ZFINZDB-GENE-090312-115 (si:ch211-15e22.3)

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