Gene: ccsapb - ENSDARG00000040085 - Danio rerio (zebrafish)

General information

Ensembl ID	ENSDARG00000040085
Name	ccsapb
Description	centriole, cilia and spindle-associated protein b [Source:ZFIN;Acc:ZDB-GENE-081107-51]
Organism	Danio rerio (zebrafish)
Synonym(s)	b0v0u9, ccsap, csap, q4v8y2, si:dkey-162b3.6

Expression

Anat. entity ID	Anatomical entity	Developmental stage(s)	Rank score	Expression score	Sources
UBERON:0000468	multi-cellular organism	[+] 5 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000026Segmentation:14-19 somites ZFS:0000024Segmentation:5-9 somites UBERON:0000066fully formed stage UBERON:0000068embryo stage	1.54e3 1.54e3 2.55e3 7.03e3 1.46e4 1.50e4	94.85 94.85 91.46 76.46 51.12 49.80	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0000033	head	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	2.71e3 2.71e3 8.08e3	90.94 90.94 72.95	AEIR AEIR AEIR
UBERON:0000966	retina	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000066fully formed stage	3.37e3 3.37e3 1.50e4	88.73 88.73 49.93	AEIR AEIR AEIR
UBERON:0000955	brain	[+] 3 stages UBERON:0000066fully formed stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000026Segmentation:14-19 somites	3.58e3 3.58e3 1.34e4 1.49e4	88.03 88.03 54.99 49.99	AEIR AEIR AEIR AEIR
UBERON:0000922	embryo	[+] 5 stages ZFS:0000037Larval:Day 5 UBERON:0004707pharyngula stage ZFS:0000029Pharyngula:Prim-5 ZFS:0000033Hatching:Long-pec UBERON:0000068embryo stage	4.56e3 4.56e3 6.00e3 6.62e3 7.26e3 7.47e3	84.74 84.74 79.91 77.82 75.69 75.00	AEIR AEIR AEIR AEIR AEIR AEIR
UBERON:0002548	larva	[+] 2 stages ZFS:0000037Larval:Day 5 UBERON:0000069larval stage	4.91e3 4.91e3 5.47e3	83.56 83.56 81.67	AEIR AEIR AEIR
UBERON:0006860	swim bladder	[+] 1 stage UBERON:0000066fully formed stage	5.49e3 5.49e3	81.61 81.61	AEIR AEIR
UBERON:0000970	eye	[+] 1 stage ZFS:0000031Pharyngula:Prim-25	5.84e3 5.84e3	80.44 80.44	AEIR AEIR
UBERON:0000307	blastula	[+] 2 stages ZFS:0000011Blastula:1k-cell ZFS:0000015Blastula:Dome	7.08e3 7.08e3 1.16e4	76.30 76.30 61.11	AEIR AEIR AEIR
UBERON:0001630	muscle organ	[+] 1 stage UBERON:0000066fully formed stage	7.11e3 7.11e3	76.20 76.20	AEIR AEIR
CL:0000094	granulocyte	[+] 1 stage UBERON:0000066fully formed stage	7.43e3 7.43e3	75.13 75.13	AEIR AEIR
UBERON:0000948	heart	[+] 2 stages UBERON:0000066fully formed stage ZFS:0000036Larval:Day 4	7.72e3 7.72e3 1.05e4	74.17 74.17 64.94	AEIR AEIR AEIR
UBERON:0007132	head kidney	[+] 1 stage UBERON:0000066fully formed stage	7.96e3 7.96e3	73.35 73.35	AEIR AEIR
UBERON:0004734	gastrula	[+] 2 stages ZFS:0000022Gastrula:Bud ZFS:0000019Gastrula:Shield	8.19e3 8.19e3 1.16e4	72.57 72.57 61.18	AEIR AEIR AEIR
UBERON:0000014	zone of skin	[+] 1 stage UBERON:0000066fully formed stage	8.53e3 8.53e3	71.44 71.44	AEIR AEIR
UBERON:0019248	early embryo	[+] 1 stage UBERON:0000107cleavage stage	8.97e3 8.97e3	69.97 69.97	AEIR AEIR
UBERON:0002481	bone tissue	[+] 1 stage UBERON:0000066fully formed stage	9.01e3 9.01e3	69.83 69.83	AEIR AEIR
UBERON:0000473	testis	[+] 1 stage UBERON:0000066fully formed stage	9.15e3 9.15e3	69.37 69.37	AEIR AEIR
UBERON:0000992	female gonad	[+] 2 stages UBERON:0000066fully formed stage UBERON:0000104life cycle	9.76e3 9.76e3 1.50e4	67.32 67.32 49.89	AEIR AEIR AEIR
UBERON:0002385	muscle tissue	[+] 1 stage UBERON:0000066fully formed stage	9.87e3 9.87e3	66.94 66.94	AEIR AEIR
UBERON:0000206	pharyngeal gill	[+] 1 stage UBERON:0000066fully formed stage	1.04e4 1.04e4	65.25 65.25	AEIR AEIR
UBERON:0002106	spleen	[+] 1 stage UBERON:0000066fully formed stage	1.05e4 1.05e4	64.90 64.90	AEIR AEIR
UBERON:0002107	liver	[+] 1 stage UBERON:0000066fully formed stage	1.11e4 1.11e4	62.89 62.89	AEIR AEIR
UBERON:0000160	intestine	[+] 1 stage UBERON:0000066fully formed stage	1.14e4 1.14e4	61.86 61.86	AEIR AEIR
UBERON:0002415	tail	[+] 1 stage UBERON:0000066fully formed stage	1.20e4 1.20e4	59.85 59.85	AEIR AEIR
UBERON:0002329	somite	[+] 2 stages ZFS:0000029Pharyngula:Prim-5 ZFS:0000026Segmentation:14-19 somites	1.37e4 1.37e4 1.39e4	54.13 54.13 53.41	AEIR AEIR AEIR

Sources
A	Affymetrix
E	EST
I	In Situ
R	RNA-Seq

data

no data

Rank scores
3.25e4	lightgrey: low confidence scores
	important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:

EST data: Bgee
In situ hybridization data: ZFIN
RNA-Seq data: Bgee

Sources of raw data:

EST data: UniGene
In situ hybridization data: ZFIN
RNA-Seq data: GEO

Cross-references

EMBL	BC063997, BC097150, CR762497
Ensembl	ENSDARG00000040085 (ccsapb)
Uniprot/SWISSPROT	CCSAP_DANRE, Q6P3G4
ZFIN	ZDB-GENE-081107-51 (ccsapb)