D. rerio Gene: si:ch73-138e16.5 - ENSDARG00000040141 - Danio rerio (zebrafish)

General information

Ensembl IDENSDARG00000040141
Namesi:ch73-138e16.5
Descriptionsi:ch73-138e16.5 [Source:ZFIN;Acc:ZDB-GENE-070705-204]
OrganismDanio rerio (zebrafish)
Synonym(s)e7fgj3

Expression

Anat. entity IDAnatomical entityDevelopmental stage(s)Rank scoreExpression scoreSources
UBERON:0000307blastula
  • ZFS:0000015Blastula:Dome
  • ZFS:0000011Blastula:1k-cell
1.65e3
  • 1.65e3
  • 1.49e4
94.48
  • 94.48
  • 50.06
AEIR
  • AEIR
  • AEIR
UBERON:0004734gastrula
  • ZFS:0000019Gastrula:Shield
  • ZFS:0000022Gastrula:Bud
3.33e3
  • 3.33e3
  • 1.08e4
88.85
  • 88.85
  • 63.67
AEIR
  • AEIR
  • AEIR
UBERON:0000970eye
  • ZFS:0000031Pharyngula:Prim-25
1.17e4
  • 1.17e4
60.93
  • 60.93
AEIR
  • AEIR
CL:0000094granulocyte
  • UBERON:0000066fully formed stage
1.43e4
  • 1.43e4
52.18
  • 52.18
AEIR
  • AEIR
UBERON:0000033head
  • ZFS:0000037Larval:Day 5
  • UBERON:0000066fully formed stage
1.48e4
  • 1.48e4
  • 2.16e4
50.53
  • 50.53
  • 27.51
AEIR
  • AEIR
  • AEIR
UBERON:0000955brain
  • UBERON:0000066fully formed stage
1.50e4
  • 1.50e4
49.87
  • 49.87
AEIR
  • AEIR
UBERON:0000922embryo
  • ZFS:0000033Hatching:Long-pec
  • ZFS:0000029Pharyngula:Prim-5
  • UBERON:0000068embryo stage
  • UBERON:0004707pharyngula stage
  • ZFS:0000037Larval:Day 5
1.51e4
  • 1.51e4
  • 1.54e4
  • 1.56e4
  • 1.70e4
  • 1.98e4
49.43
  • 49.43
  • 48.43
  • 47.90
  • 43.10
  • 33.77
AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
  • AEIR
UBERON:0002106spleen
  • UBERON:0000066fully formed stage
1.53e4
  • 1.53e4
48.69
  • 48.69
AEIR
  • AEIR
UBERON:0019248early embryo
  • UBERON:0000107cleavage stage
1.74e4
  • 1.74e4
41.85
  • 41.85
AEIR
  • AEIR
UBERON:0002415tail
  • UBERON:0000066fully formed stage
1.79e4
  • 1.79e4
39.96
  • 39.96
AEIR
  • AEIR
UBERON:0002548larva
  • ZFS:0000037Larval:Day 5
  • UBERON:0000069larval stage
1.80e4
  • 1.80e4
  • 1.82e4
39.76
  • 39.76
  • 38.99
AEIR
  • AEIR
  • AEIR
UBERON:0001630muscle organ
  • UBERON:0000066fully formed stage
1.85e4
  • 1.85e4
38.06
  • 38.06
AEIR
  • AEIR
UBERON:0000014zone of skin
  • UBERON:0000066fully formed stage
1.86e4
  • 1.86e4
37.72
  • 37.72
AEIR
  • AEIR
UBERON:0000473testis
  • UBERON:0000066fully formed stage
1.87e4
  • 1.87e4
37.22
  • 37.22
AEIR
  • AEIR
UBERON:0000206pharyngeal gill
  • UBERON:0000066fully formed stage
1.88e4
  • 1.88e4
36.97
  • 36.97
AEIR
  • AEIR
UBERON:0000948heart
  • UBERON:0000066fully formed stage
  • ZFS:0000036Larval:Day 4
1.97e4
  • 1.97e4
  • 2.01e4
33.88
  • 33.88
  • 32.53
AEIR
  • AEIR
  • AEIR
UBERON:0002385muscle tissue
  • UBERON:0000066fully formed stage
2.05e4
  • 2.05e4
31.24
  • 31.24
AEIR
  • AEIR
UBERON:0006860swim bladder
  • UBERON:0000066fully formed stage
2.17e4
  • 2.17e4
27.34
  • 27.34
AEIR
  • AEIR
UBERON:0007132head kidney
  • UBERON:0000066fully formed stage
2.42e4
  • 2.42e4
19.13
  • 19.13
AEIR
  • AEIR
Sources
AAffymetrix
EEST
IIn Situ
RRNA-Seq
data
no data
Rank scores
3.25e4lightgrey: low confidence scores

important score variation

Rank scores of expression calls are normalized across genes, conditions and species. Low score means that the gene is highly expressed in the condition. Max rank score in all species: 4.10e4. Min rank score varies across species.

Expression scores of expression calls use the minimum and maximum Rank of the species to normalize the expression to a value between 0 and 100. Low score means that the gene is lowly expressed in the condition.

Sources of annotations to anatomy and development:
  • RNA-Seq data: Bgee
Sources of raw data:
  • RNA-Seq data: GEO

Cross-references

EMBLCU207221
EnsemblENSDARG00000040141 (si:ch73-138e16.5)
Uniprot/SPTREMBLA5WWL2, A5WWL2_DANRE
ZFINZDB-GENE-070705-204 (si:ch73-138e16.5)

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